MaxSub is a program to evaluate the quality of predicted protein structure models.
MaxSub is described in
Siew et al, Bioinformatics, In Press
MaxSub will be used as the automatic evaluation tool in
the quality of your model.
See the MaxSub evaluation tables that we have applied to the targets from CASP3:
Fold Recognition Targets
Homology Modeling Targets
of MaxSub superpositions.