contextFold: RNA secondary structure prediction package

Packages
contextFold The contextFold package supplies java source code for RNA secondary structure prediction utilities.
contextFold.app Contains java-executable programs that perform the main functionalities of the contextFold package.
contextFold.common Bundles general auxiliary functionalities.
contextFold.features Contains scoring model's parameterization related functionalities.
contextFold.learn Contains weight learning related functionalities.
contextFold.models Contains a set of pre-defined (untrained) parameterizations.
contextFold.rna Contains RNA representation related utilities.
contextFold.rnaFolding Contains RNA secondary structure prediction related utilities.
contextFold.scoring Contains RNA secondary structure scoring and similarity computation related utilities.