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U

U - Static variable in class contextFold.rna.RNA
 
UN_PAIRED - Static variable in class contextFold.rna.RNA
 
uncompress() - Method in class contextFold.features.DenseFeatureVector
 
UNPAIRED - Static variable in class contextFold.rnaFolding.Traceback
 
UNPAIRED_BASE - Static variable in interface contextFold.rnaFolding.StructureRecognizer
 
upd - Variable in class contextFold.features.DenseFeatureVector
 
update(AbstractFeatureVector, float) - Method in class contextFold.features.DenseFeatureVector
Executes add(other, s), while maintaining an inner state that allows averaging over all updates.
updateKbest(int[][], int[], float[], int, int, int, RNA) - Method in class contextFold.learn.Learn
 
updateTime - Variable in class contextFold.features.DenseFeatureVector
 
Utils - Class in contextFold.common
 
Utils() - Constructor for class contextFold.common.Utils
 

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