contextFold.rna
Class OneLineReader
java.lang.Object
contextFold.rna.RNAListReader
contextFold.rna.OneLineReader
public class OneLineReader
- extends RNAListReader
Method Summary |
java.util.List<RNA> |
readList(java.lang.CharSequence list)
|
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
extendedRNARegexp
public static final java.lang.String extendedRNARegexp
- See Also:
- Constant Field Values
FoldingRegexp
public static final java.lang.String FoldingRegexp
- See Also:
- Constant Field Values
RNALine_Regexp
public static final java.lang.String RNALine_Regexp
- See Also:
- Constant Field Values
FoldingLineRegexp
public static final java.lang.String FoldingLineRegexp
- See Also:
- Constant Field Values
RNAItemRegexp
public static final java.lang.String RNAItemRegexp
- See Also:
- Constant Field Values
RNAItemPattern
public static final java.util.regex.Pattern RNAItemPattern
ITEM_GROUP
public static final int ITEM_GROUP
- See Also:
- Constant Field Values
ANNOTATION_GROUP
public static final int ANNOTATION_GROUP
- See Also:
- Constant Field Values
SEQUENCE_GROUP
public static final int SEQUENCE_GROUP
- See Also:
- Constant Field Values
STRUCTURE_GROUP
public static final int STRUCTURE_GROUP
- See Also:
- Constant Field Values
OneLineReader
public OneLineReader()
readList
public java.util.List<RNA> readList(java.lang.CharSequence list)
- Specified by:
readList
in class RNAListReader