meshi.util
Interface MeshiAttribute

All Known Implementing Classes:

Ala, Arg, Asn, Asp, BackboneResidue, BeautifyAttribute, CalculateEnergyFromStructuresListAverages.DistanceFromCatalyticAttribute, CalculateEnergyFromStructuresListAverages.GaussianAttributes, CaResidue, ColorByEnergy.DistanceFromCatalyticAttribute, ColorByEnergy.GaussianAttributes, Cys, Gln, Glu, Gly, HB_AtomAttribute, HB_DistanceAttribute, His, HomologyModeling.LoopAttribute, HydrogenBondsParameters, Ile, ImageResidue, LennardJonesParameters, Leu, Lys, Met, OriginalAtom, Pdb2Fasta.MyResidue, Phe, Pro, Residue, ResidueExtendedAtoms, ResidueTorsionsAttribute, ResidueTorsionsPropensityAttribute, SecondaryStructure, SequenceAlignmentCell, SequenceAlignmentColumn, Ser, SideChainSolvateDistanceAttribute, SolvateDistanceAttribute, SolvateDistanceAttributeBetweenPolars, SolvateDistanceAttributeNonPolarPolar, SolvateDistanceAttributePolarNonPolar, SolvateDistanceAttributeWithAhydrogen, SolvateDistanceAttributeWithNonPolar, SolvateRot1DistanceAttribute, SummaAttribute, Thr, Trp, Tyr, Val

public interface MeshiAttribute

Field Summary

static int	BEAUTIFY_ATTRIBUTE
static int	CN_ATTRIBUTE
static int	DISTANCE_FROM_CATALYTIC_ATTRIBUTE
static int	EXCLUDED_VOLUME_ELEMENT_ATTRIBUTE
static int	GAUSSIAN_ALPHA
static int	GAUSSIAN_ATTRIBUTE
static int	HYDROGEN_BONDS_ATTRIBUTE
static int	LENNARD_JONES_ELEMENT_ATTRIBUTE
static int	LOOP_RESIDUE
static int	ORIGINAL_ATOM
static int	RESIDUE_ATTRIBUTE
static int	RESIDUE_TORSIONS_ATTRIBUTE
static int	SECONDARY_STRUCTURE_ATTRIBUTE
static int	SEQUENCE_ALIGNMENT_COLUMN_ATTRIBUTE
static int	SIDE_CHAIN_SOLVATE_ALL_ATOM_ATTRIBUTE
static int	SOLVATE_ALL_ATOM_ATTRIBUTE
static int	SOLVATE_CA_ATTRIBUTE
static int	SOLVATE_ROT1_ATTRIBUTE
static int	SUMMA_ATTRIBUTE

Method Summary

int

key()

Field Detail

LENNARD_JONES_ELEMENT_ATTRIBUTE

static final int LENNARD_JONES_ELEMENT_ATTRIBUTE

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EXCLUDED_VOLUME_ELEMENT_ATTRIBUTE

static final int EXCLUDED_VOLUME_ELEMENT_ATTRIBUTE

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HYDROGEN_BONDS_ATTRIBUTE

static final int HYDROGEN_BONDS_ATTRIBUTE

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CN_ATTRIBUTE

static final int CN_ATTRIBUTE

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SEQUENCE_ALIGNMENT_COLUMN_ATTRIBUTE

static final int SEQUENCE_ALIGNMENT_COLUMN_ATTRIBUTE

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SOLVATE_ALL_ATOM_ATTRIBUTE

static final int SOLVATE_ALL_ATOM_ATTRIBUTE

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SOLVATE_CA_ATTRIBUTE

static final int SOLVATE_CA_ATTRIBUTE

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RESIDUE_ATTRIBUTE

static final int RESIDUE_ATTRIBUTE

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GAUSSIAN_ATTRIBUTE

static final int GAUSSIAN_ATTRIBUTE

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GAUSSIAN_ALPHA

static final int GAUSSIAN_ALPHA

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SECONDARY_STRUCTURE_ATTRIBUTE

static final int SECONDARY_STRUCTURE_ATTRIBUTE

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DISTANCE_FROM_CATALYTIC_ATTRIBUTE

static final int DISTANCE_FROM_CATALYTIC_ATTRIBUTE

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BEAUTIFY_ATTRIBUTE

static final int BEAUTIFY_ATTRIBUTE

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LOOP_RESIDUE

static final int LOOP_RESIDUE

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ORIGINAL_ATOM

static final int ORIGINAL_ATOM

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SOLVATE_ROT1_ATTRIBUTE

static final int SOLVATE_ROT1_ATTRIBUTE

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SIDE_CHAIN_SOLVATE_ALL_ATOM_ATTRIBUTE

static final int SIDE_CHAIN_SOLVATE_ALL_ATOM_ATTRIBUTE

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SUMMA_ATTRIBUTE

static final int SUMMA_ATTRIBUTE

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RESIDUE_TORSIONS_ATTRIBUTE

static final int RESIDUE_TORSIONS_ATTRIBUTE

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Method Detail

key

int key()