meshi.symmetryComplex.molecularImageElements
Class ImageAtom

java.lang.Object
  meshi.molecularElements.atoms.Atom
      meshi.symmetryComplex.molecularImageElements.ImageAtom

All Implemented Interfaces:

java.lang.Comparable, Attributable, Verbose

public class ImageAtom
extends Atom

Created by IntelliJ IDEA. User: tetyanam Date: 22/12/2008 Time: 12:13:21 To change this template use File | Settings | File Templates.

Field Summary

private Atom	source
private Transformation	transformation

Fields inherited from class meshi.molecularElements.atoms.Atom

bonded, core, ID, molecularSystem, name, residue

Constructor Summary

ImageAtom(Atom source, Transformation transformation)

Method Summary

void	buildLocation()
Atom	source()
Transformation	transformation()
protected void	updateLocation()

Methods inherited from class meshi.molecularElements.atoms.Atom

active, addAttribute, addEnergy, addToFx, addToFy, addToFz, addToX, addToY, addToZ, alternateLocation, backboneC, backboneCA, backboneH, backboneN, backboneO, bbAtom, bond, bonded, chain, comment, compareTo, defrost, distanceFrom, emptyBonded, energy, freeze, frozen, fx, fy, fz, getAttribute, hide, isBackbone, isCarbon, isHydrogen, isNitrogen, isOxygen, isSulfur, name, nameIs, nameIs, normal, nowhere, number, numberOfAtoms, occupancy, pdbLine, randomize, randomize, reliability, resetCoordinates, resetEnergy, residue, residueName, residueNumber, setFx, setFy, setFz, setMolecularSystem, setReliability, setResidue, setResidueNumber, setStatus, setTemperatureFactor, setType, setXYZ, setXYZ, setXYZ, temperatureFactor, toString, type, verbose, x, X, y, Y, z, Z

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

source

private Atom source

transformation

private Transformation transformation

Constructor Detail

ImageAtom

public ImageAtom(Atom source,
                 Transformation transformation)

Method Detail

buildLocation

public void buildLocation()

updateLocation

protected void updateLocation()

source

public Atom source()

transformation

public final Transformation transformation()