meshi.symmetryComplex.energy
Class SymmetryEnergy

java.lang.Object
  meshi.energy.AbstractEnergy
      meshi.energy.simpleEnergyTerms.SimpleEnergyTerm
          meshi.symmetryComplex.energy.SymmetryEnergy

All Implemented Interfaces:

Attributable, Updateable

public class SymmetryEnergy
extends SimpleEnergyTerm

Nested Class Summary

Nested classes/interfaces inherited from class meshi.energy.AbstractEnergy

AbstractEnergy.UpdateableList

Field Summary

Fields inherited from class meshi.energy.simpleEnergyTerms.SimpleEnergyTerm

elementsList, parametersList

Fields inherited from class meshi.energy.AbstractEnergy

comment, filter, INFINITY, NaN, on, updateableResources, weight

Constructor Summary

SymmetryEnergy(SymmetricComplex symmetricComplex, DistanceMatrix distanceMatrix, ParametersList parametersList, double weight)

Method Summary

EnergyElement	createElement(java.lang.Object baseElement, Parameters parameters)
void	test(TotalEnergy totalEnergy, Atom atom) Testing of one atom in all energy elements

Methods inherited from class meshi.energy.simpleEnergyTerms.SimpleEnergyTerm

createElementsList, elementsList, evaluate, evaluateAtoms

Methods inherited from class meshi.energy.AbstractEnergy

addAttribute, comment, getAttribute, handleMissingParameters, isOn, off, on, toArray, toArray, toArray, toArray, toString, update

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

SymmetryEnergy

public SymmetryEnergy(SymmetricComplex symmetricComplex,
                      DistanceMatrix distanceMatrix,
                      ParametersList parametersList,
                      double weight)

Method Detail

createElement

public EnergyElement createElement(java.lang.Object baseElement,
                                   Parameters parameters)

Specified by:

createElement in class SimpleEnergyTerm

test

public void test(TotalEnergy totalEnergy,
                 Atom atom)

Description copied from class: SimpleEnergyTerm

Testing of one atom in all energy elements

Overrides:

test in class SimpleEnergyTerm

Parameters:

totalEnergy - a TotalEnergy value

atom - an criminal Atom value