Package meshi.sequences

Sequence manipulation tools.

See:
          Description

Class Summary
AccesibilitySequence  
AccesibilitySequence.AccesibilitySequenceCharFilter  
AlignmentCell A container for a protein element and its number.
AlignmentColumn A container for an ordered set of coresponding protein elements.
AtomAlignment  
AtomAlignment.IsAlignmentColumn  
AtomAlignmentCell  
AtomAlignmentColumn  
FastaList  
ResidueAlignment  
ResidueAlignmentCell  
ResidueAlignmentColumn A pair of residues each from a different Protein object and a string indicating which atoms in these residues should be aligned.
ResidueAlignmentOfModels Residue alignment of multiple protein objects, all representing the same protein.
ResidueSequence  
ResidueSequence.ResidueSequenceCharFilter  
SecondaryStructureSequence  
SecondaryStructureSequence.SecondaryStructureSequenceCharFilter  
Sequence Sequence is a single row alignment.
Sequence.kolDichfin  
SequenceAlignment  
SequenceAlignmentCell  
SequenceAlignmentColumn  
SequenceCharFilter  
SequenceList  
SequenceList.AcceptAll  
SequenceList.IsSequenceFilter  
 

Exception Summary
ResidueTypeException  
 

Package meshi.sequences Description

Sequence manipulation tools.