meshi.sequences
Class AtomAlignmentColumn

java.lang.Object
  meshi.sequences.AlignmentColumn
      meshi.sequences.AtomAlignmentColumn

public class AtomAlignmentColumn
extends AlignmentColumn

Field Summary

Fields inherited from class meshi.sequences.AlignmentColumn

cells

Constructor Summary

AtomAlignmentColumn(Atom atom0, Atom atom1)

AtomAlignmentColumn(Atom atom0, java.lang.String comment0, Atom atom1, java.lang.String comment1)

Method Summary

(package private) Atom

atomAt(int index)

Methods inherited from class meshi.sequences.AlignmentColumn

add, allGaps, cell, cell0, cell1, hasGap, size, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

AtomAlignmentColumn

public AtomAlignmentColumn(Atom atom0,
                           java.lang.String comment0,
                           Atom atom1,
                           java.lang.String comment1)

AtomAlignmentColumn

public AtomAlignmentColumn(Atom atom0,
                           Atom atom1)

Method Detail

atomAt

Atom atomAt(int index)