meshi.parameters
Enum ResidueType

java.lang.Object
  java.lang.Enum<ResidueType>
      meshi.parameters.ResidueType

All Implemented Interfaces:

java.io.Serializable, java.lang.Comparable<ResidueType>

public enum ResidueType
extends java.lang.Enum<ResidueType>

Enum Constant Summary

ALA

ARG

ARO

ASN

ASP

ASQ

CCS

CME

CREATOR

CSE

CSW

CSX

CSZ

CYS

DMY

GLN

GLU

GLY

HEL

HHS

HIS

ILE

LEU

LYS

MET

MSE

OCS

PCA

PHD

PHE

PRO

SEP

SER

SLN

SMC

SYG

THR

TRP

TYR

VAL

YMC

Field Summary

private AtomType	caType
private AtomType	cbType
private AtomType	cType
private AtomType	hType
private java.lang.String	nameOneLetter
private java.lang.String	nameThreeLetters
private AtomType	nType
private AtomType	oType
private boolean	standard

Method Summary

AtomType	caType()
AtomType	cbType()
AtomType	cType()
AtomType	hType()
java.lang.String	nameOneLetter()
java.lang.String	nameThreeLetters()
AtomType	nType()
AtomType	oType()
boolean	standard()
static ResidueType	type(AtomType atomType)
static ResidueType	type(char name)
static ResidueType	type(java.lang.String name)
static ResidueType	valueOf(java.lang.String name) Returns the enum constant of this type with the specified name.
static ResidueType[]	values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

ALA

public static final ResidueType ALA

CYS

public static final ResidueType CYS

ASP

public static final ResidueType ASP

GLU

public static final ResidueType GLU

PHE

public static final ResidueType PHE

GLY

public static final ResidueType GLY

HIS

public static final ResidueType HIS

ILE

public static final ResidueType ILE

LYS

public static final ResidueType LYS

LEU

public static final ResidueType LEU

MET

public static final ResidueType MET

ASN

public static final ResidueType ASN

PRO

public static final ResidueType PRO

GLN

public static final ResidueType GLN

ARG

public static final ResidueType ARG

SER

public static final ResidueType SER

THR

public static final ResidueType THR

VAL

public static final ResidueType VAL

TRP

public static final ResidueType TRP

TYR

public static final ResidueType TYR

MSE

public static final ResidueType MSE

YMC

public static final ResidueType YMC

SLN

public static final ResidueType SLN

CSE

public static final ResidueType CSE

CSW

public static final ResidueType CSW

CSZ

public static final ResidueType CSZ

OCS

public static final ResidueType OCS

SMC

public static final ResidueType SMC

SYG

public static final ResidueType SYG

CME

public static final ResidueType CME

CCS

public static final ResidueType CCS

CSX

public static final ResidueType CSX

SEP

public static final ResidueType SEP

ASQ

public static final ResidueType ASQ

PHD

public static final ResidueType PHD

PCA

public static final ResidueType PCA

ARO

public static final ResidueType ARO

HHS

public static final ResidueType HHS

DMY

public static final ResidueType DMY

CREATOR

public static final ResidueType CREATOR

HEL

public static final ResidueType HEL

Field Detail

nameThreeLetters

private final java.lang.String nameThreeLetters

nameOneLetter

private final java.lang.String nameOneLetter

caType

private final AtomType caType

hType

private final AtomType hType

nType

private final AtomType nType

cType

private final AtomType cType

oType

private final AtomType oType

cbType

private final AtomType cbType

standard

private final boolean standard

Method Detail

values

public static ResidueType[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (ResidueType c : ResidueType.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static ResidueType valueOf(java.lang.String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

java.lang.IllegalArgumentException - if this enum type has no constant with the specified name

java.lang.NullPointerException - if the argument is null

nameThreeLetters

public java.lang.String nameThreeLetters()

nameOneLetter

public java.lang.String nameOneLetter()

hType

public AtomType hType()

nType

public AtomType nType()

caType

public AtomType caType()

cType

public AtomType cType()

oType

public AtomType oType()

cbType

public AtomType cbType()

standard

public boolean standard()

type

public static ResidueType type(java.lang.String name)

type

public static ResidueType type(char name)

type

public static ResidueType type(AtomType atomType)