Hierarchy For Package meshi.geometry

Package Hierarchies:

All Packages

Class Hierarchy

• java.lang.Object
  • java.util.AbstractCollection<E> (implements java.util.Collection<E>)
    • java.util.AbstractList<E> (implements java.util.List<E>)
      • java.util.ArrayList<E> (implements java.lang.Cloneable, java.util.List<E>, java.util.RandomAccess, java.io.Serializable)
        • meshi.geometry.AngleList (implements meshi.util.Updateable)
          • meshi.geometry.QuickAndDirtyAngleList
        • meshi.geometry.GridCell
        • meshi.geometry.TorsionList (implements meshi.util.Updateable)
          • meshi.geometry.QuickAndDirtyTorsionList
        • meshi.geometry.TorsionPairList (implements meshi.util.Updateable)
  • meshi.geometry.Angle (implements meshi.util.Updateable)
    • meshi.geometry.QuickAndDirtyAngle
  • meshi.geometry.ArcCos
  • meshi.geometry.Coordinates
    • meshi.geometry.FrozenCoordinates
  • meshi.geometry.Distance (implements meshi.util.Attributable)
    • meshi.geometry.BondedDistance
    • meshi.geometry.DistanceMirror
    • meshi.geometry.FreeDistance
    • meshi.geometry.FrozenDistance
      • meshi.geometry.BondedFrozenDistance
  • meshi.geometry.DistanceList (implements java.lang.Iterable<T>)
    • meshi.geometry.MatrixRow
      • meshi.geometry.MatrixRowCaOnly
  • meshi.geometry.DistanceList.DistanceIterator (implements java.util.Iterator<E>)
  • meshi.geometry.DistanceMatrix.Indicator
  • meshi.geometry.DistanceMatrix.RowIterator (implements java.util.Iterator<E>)
  • meshi.geometry.DistanceMatrixBondedOnly.DistanceComparator (implements java.util.Comparator<T>)
  • meshi.geometry.Grid
  • meshi.util.MeshiProgram
    • meshi.geometry.DistanceMatrix (implements meshi.util.Updateable)
      • meshi.geometry.DistanceMatrixBondedOnly
      • meshi.geometry.DistanceMatrixCaOnly
      • meshi.geometry.OldDistanceMatrix
  • meshi.geometry.OldDistanceMatrix.Indicator
  • meshi.geometry.OldDistanceMatrix.RowIterator (implements java.util.Iterator<E>)
  • meshi.geometry.OldGrid
  • meshi.geometry.ResidueBuilder
  • meshi.geometry.Torsion (implements meshi.util.Updateable)
    • meshi.geometry.QuickAndDirtyTorsion
  • meshi.geometry.TorsionList.FilterChi1 (implements meshi.util.filters.Filter)
  • meshi.geometry.TorsionList.FilterChi2 (implements meshi.util.filters.Filter)
  • meshi.geometry.TorsionList.FilterChi3 (implements meshi.util.filters.Filter)
  • meshi.geometry.TorsionList.FilterChi4 (implements meshi.util.filters.Filter)
  • meshi.geometry.TorsionList.FilterOOP (implements meshi.util.filters.Filter)
  • meshi.geometry.TorsionList.FilterPhi (implements meshi.util.filters.Filter)
  • meshi.geometry.TorsionList.FilterPsi (implements meshi.util.filters.Filter)
  • meshi.geometry.TorsionList.FilterSideChain (implements meshi.util.filters.Filter)
  • meshi.geometry.TorsionPair (implements meshi.util.Updateable)
  • meshi.geometry.ViewAt

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • meshi.geometry.DistanceMode