Package meshi.geometry

Atom distances, angles and torsion angles.

See:
Description

Class Summary

Angle	--------------------------- Angle -----------------------------------
AngleList
ArcCos	Class ArcCos.
BondedDistance
BondedFrozenDistance
Coordinates
Distance	The distance between two meshi.molecularElements.atoms .
DistanceList
DistanceList.DistanceIterator
DistanceMatrix	Where all the headache of distances is handled.
DistanceMatrixBondedOnly
DistanceMatrixCaOnly	A Distance Matrix specifically tailored for Calpha model.
DistanceMirror
FreeDistance	The distance between two Atoms .
FrozenCoordinates
FrozenDistance
Grid
GridCell
MatrixRow
MatrixRowCaOnly
OldDistanceMatrix	Where all the headache of distances is handled.
OldGrid
QuickAndDirtyAngle	Allows the use of approximated arc-cos function.
QuickAndDirtyAngleList	A list of quick and dirty angles.
QuickAndDirtyTorsion	Allows the use of approximated arc-cos function.
QuickAndDirtyTorsionList	A list of quick and dirty torsion angles.
ResidueBuilder
Torsion	--------------------------- Torsion ----------------------------------- Addapted from Ron Elber's MOIL (ephi).
TorsionList
TorsionList.FilterChi1
TorsionList.FilterChi2
TorsionList.FilterChi3
TorsionList.FilterChi4
TorsionList.FilterOOP
TorsionList.FilterPhi
TorsionList.FilterPsi
TorsionList.FilterSideChain
TorsionPair	This class defines a torsion pair for the use of the various two torsion energies.
TorsionPairList	A list of torsion pairs, used mainly for the various two torsion energies.
ViewAt	Title:

Enum Summary

DistanceMode

Package meshi.geometry Description

Atom distances, angles and torsion angles.