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Class Summary |
| SmoothRotamerLibraryEnergy |
Smooth rotamer library energy term. |
| SmoothRotamerLibraryEnergyCreator |
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| SmoothRotamerLibraryEnergyElement |
Encapsulation of SmoothRotamer energy value for a single residue. |
| SmoothRotamerLibraryEnergyElementChi0 |
Smooth rotamer library energy element for amino acids with no
sidechain torsion angles: ALA, GLY. |
| SmoothRotamerLibraryEnergyElementChi1 |
Smooth rotamer library energy element for amino acids with one
sidechain torsion angle: CYS, SER, THR, VAL. |
| SmoothRotamerLibraryEnergyElementChi2 |
Smooth rotamer library energy element for amino acids with two
sidechain torsion angles: ASP, PHE, HIS, ILE, LEU, ASN, PRO,
TRP, TYR. |
| SmoothRotamerLibraryEnergyElementChi3 |
Smooth rotamer library energy element for amino acids with three
sidechain torsion angles: GLU, MET, GLN. |
| SmoothRotamerLibraryEnergyElementChi4 |
Smooth rotamer library parameters for amino acids with four
sidechain torsion angles: LYS, ARG. |
| SmoothRotamerLibraryParameters |
Parameters used with the SmoothRotamerLibraryEnergy term. |
| SmoothRotamerLibraryParametersChi0 |
Smooth rotamer library parameters for amino acids with no
sidechain torsion angles: ALA, GLY. |
| SmoothRotamerLibraryParametersChi1 |
Smooth rotamer library parameters for amino acids with one
sidechain torsion angle: CYS, SER, THR, VAL. |
| SmoothRotamerLibraryParametersChi2 |
Smooth rotamer library parameters for amino acids with two
sidechain torsion angles: ASP, PHE, HIS, ILE, LEU, ASN, PRO,
TRP, TYR. |
| SmoothRotamerLibraryParametersChi3 |
Smooth rotamer library parameters for amino acids with three
sidechain torsion angles: GLU, MET, GLN. |
| SmoothRotamerLibraryParametersChi4 |
Smooth rotamer library parameters for amino acids with four
sidechain torsion angles: LYS, ARG. |
| SmoothRotamerLibraryParametersList |
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