meshi.energy.sideChainModelingSolvate
Class SideChainSolvateDistanceAttribute

java.lang.Object
  meshi.energy.sideChainModelingSolvate.SideChainSolvateDistanceAttribute

All Implemented Interfaces:

MeshiAttribute

public class SideChainSolvateDistanceAttribute
extends java.lang.Object
implements MeshiAttribute

This class is a truncated form of the corresponding class in the "meshi.energy.solvate" package. It was designed solely for accelerating the application SCMOD (concurrent sidechain modeling), and should not be used for other purposes. Please do not use it!

Field Summary

double	sigmCa1
double	sigmCa2
double	sigmHBa1
double	sigmHBa2

Fields inherited from interface meshi.util.MeshiAttribute

BEAUTIFY_ATTRIBUTE, CN_ATTRIBUTE, DISTANCE_FROM_CATALYTIC_ATTRIBUTE, EXCLUDED_VOLUME_ELEMENT_ATTRIBUTE, GAUSSIAN_ALPHA, GAUSSIAN_ATTRIBUTE, HYDROGEN_BONDS_ATTRIBUTE, LENNARD_JONES_ELEMENT_ATTRIBUTE, LOOP_RESIDUE, ORIGINAL_ATOM, RESIDUE_ATTRIBUTE, RESIDUE_TORSIONS_ATTRIBUTE, SECONDARY_STRUCTURE_ATTRIBUTE, SEQUENCE_ALIGNMENT_COLUMN_ATTRIBUTE, SIDE_CHAIN_SOLVATE_ALL_ATOM_ATTRIBUTE, SOLVATE_ALL_ATOM_ATTRIBUTE, SOLVATE_CA_ATTRIBUTE, SOLVATE_ROT1_ATTRIBUTE, SUMMA_ATTRIBUTE

Constructor Summary

SideChainSolvateDistanceAttribute()

Method Summary

int	key()
void	resetAllSigmVals()
private void	resetHBSigmVals()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

sigmCa1

public double sigmCa1

sigmHBa1

public double sigmHBa1

sigmCa2

public double sigmCa2

sigmHBa2

public double sigmHBa2

Constructor Detail

SideChainSolvateDistanceAttribute

public SideChainSolvateDistanceAttribute()

Method Detail

key

public int key()

Specified by:

key in interface MeshiAttribute

resetHBSigmVals

private final void resetHBSigmVals()

resetAllSigmVals

public final void resetAllSigmVals()