Hierarchy For Package meshi.energy.hydrogenBond

Package Hierarchies:

All Packages

Class Hierarchy

• java.lang.Object
  • java.util.AbstractCollection<E> (implements java.util.Collection<E>)
    • java.util.AbstractList<E> (implements java.util.List<E>)
      • java.util.ArrayList<E> (implements java.lang.Cloneable, java.util.List<E>, java.util.RandomAccess, java.io.Serializable)
        • meshi.energy.simpleEnergyTerms.ParametersList
          • meshi.energy.hydrogenBond.LennardJonesParametersList
            • meshi.energy.hydrogenBond.HydrogenBondsParametersList
  • meshi.energy.AbstractEnergy (implements meshi.util.Attributable, meshi.util.Updateable)
    • meshi.energy.pairwiseNonBondedTerms.NonBondedEnergyTerm
      • meshi.energy.hydrogenBond.HydrogenBondsEnergy
  • meshi.geometry.DistanceList (implements java.lang.Iterable<T>)
    • meshi.energy.hydrogenBond.HBdistanceList
      • meshi.energy.hydrogenBond.HBondList (implements meshi.util.Updateable)
  • meshi.energy.EnergyCreator (implements meshi.util.KeyWords, meshi.parameters.MeshiPotential)
    • meshi.energy.hydrogenBond.HydrogenBondsCreator (implements meshi.util.KeyWords)
  • meshi.energy.EnergyElement
    • meshi.energy.pairwiseNonBondedTerms.NonBondedEnergyElement
      • meshi.energy.hydrogenBond.HydrogenBondsEnergyElement
  • meshi.energy.hydrogenBond.GoodResiduesForHB (implements meshi.util.filters.Filter)
  • meshi.energy.hydrogenBond.GoodResiduesForHB.GoodSS (implements meshi.util.filters.Filter)
  • meshi.energy.hydrogenBond.GoodResiduesForHB.IsNot13 (implements meshi.util.filters.Filter)
  • meshi.energy.hydrogenBond.HB_AtomAttribute (implements meshi.util.MeshiAttribute)
  • meshi.energy.hydrogenBond.HB_DistanceAttribute (implements meshi.util.MeshiAttribute)
  • meshi.energy.hydrogenBond.HBondList.IsAlive (implements meshi.util.filters.Filter)
  • meshi.energy.hydrogenBond.HBondList.IsWithInRmax (implements meshi.util.filters.Filter)
  • meshi.energy.hydrogenBond.HBondList.WithinRmaxIterator (implements java.util.Iterator<E>)
  • meshi.energy.hydrogenBond.IsHO (implements meshi.util.filters.Filter)
  • meshi.energy.hydrogenBond.LennardJonesParameters (implements meshi.util.MeshiAttribute, meshi.energy.Parameters)
    • meshi.energy.hydrogenBond.HydrogenBondsParameters
  • meshi.energy.hydrogenBond.LennardJonesParameters.isA (implements meshi.util.filters.Filter)
  • java.lang.Throwable (implements java.io.Serializable)
    • java.lang.Exception
      • java.lang.RuntimeException
        • java.lang.IllegalStateException
          • meshi.energy.hydrogenBond.SynchronizedUpdateException