meshi.applications.prediction.beautify.unWarpEnergy
Class UnWarpEnergyElementsList

java.lang.Object
  java.util.AbstractCollection<E>
      java.util.AbstractList<E>
          java.util.ArrayList<UnWarpEnergyElement>
              meshi.applications.prediction.beautify.unWarpEnergy.UnWarpEnergyElementsList

All Implemented Interfaces:

java.io.Serializable, java.lang.Cloneable, java.lang.Iterable<UnWarpEnergyElement>, java.util.Collection<UnWarpEnergyElement>, java.util.List<UnWarpEnergyElement>, java.util.RandomAccess, Updateable

public class UnWarpEnergyElementsList
extends java.util.ArrayList<UnWarpEnergyElement>
implements Updateable

See Also:

Serialized Form

Field Summary

private int

numberOfUpdates

Fields inherited from class java.util.AbstractList

modCount

Constructor Summary

UnWarpEnergyElementsList(Protein protein, double weight)

Method Summary

void	update()
void	update(int numberOfUpdates) Updates the distances.

Methods inherited from class java.util.ArrayList

add, add, addAll, addAll, clear, clone, contains, ensureCapacity, get, indexOf, isEmpty, lastIndexOf, remove, remove, removeRange, set, size, toArray, toArray, trimToSize

Methods inherited from class java.util.AbstractList

equals, hashCode, iterator, listIterator, listIterator, subList

Methods inherited from class java.util.AbstractCollection

containsAll, removeAll, retainAll, toString

Methods inherited from class java.lang.Object

finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface java.util.List

containsAll, equals, hashCode, iterator, listIterator, listIterator, removeAll, retainAll, subList

Field Detail

numberOfUpdates

private int numberOfUpdates

Constructor Detail

UnWarpEnergyElementsList

public UnWarpEnergyElementsList(Protein protein,
                                double weight)

Method Detail

update

public void update(int numberOfUpdates)
            throws UpdateableException

Updates the distances.

Specified by:

update in interface Updateable

Throws:

UpdateableException

update

public void update()