meshi.applications.corpus
Class RunThreadingExperiment

java.lang.Object
  meshi.util.MeshiProgram
      meshi.applications.corpus.RunThreadingExperiment

public class RunThreadingExperiment
extends MeshiProgram

Field Summary

private static java.lang.String	corpusFileName
private static int	fragL
private static int	Nexp
private static int	Ninst
private static int	RMSind1
private static int	RMSind2

Fields inherited from class meshi.util.MeshiProgram

commandLine, name

Constructor Summary

RunThreadingExperiment()

Method Summary

protected static void	init(java.lang.String[] args) ================================= init ========================================= A static function for parsing of the command line arguments and assigning the variables commandsFileName, modelFileName and randomNumberSeed with the right inputs.
static void	main(java.lang.String[] args)

Methods inherited from class meshi.util.MeshiProgram

about, debug, get2ndString, getb, getB, getd, getD, getFlag, getFlagedArgument, geti, getI, getOrderedArgument, getS, getS, initRandom, initRandom, initRandom, printGlobalTable, randomNumberGenerator, seed, tableGet, tableIncludes, tableSet, toString, verbose

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

corpusFileName

private static java.lang.String corpusFileName

Nexp

private static int Nexp

Ninst

private static int Ninst

fragL

private static int fragL

RMSind1

private static int RMSind1

RMSind2

private static int RMSind2

Constructor Detail

RunThreadingExperiment

public RunThreadingExperiment()

Method Detail

main

public static void main(java.lang.String[] args)

init

protected static void init(java.lang.String[] args)

================================= init ========================================= A static function for parsing of the command line arguments and assigning the variables commandsFileName, modelFileName and randomNumberSeed with the right inputs. Note that this static method is using parsing functions such as getOrderedArguments that are defined in MeshiProgram that MinimizeProtein inherits.