Class HomologyModeling.Loop

java.lang.Object
  java.util.AbstractCollection<E>
      java.util.AbstractList<E>
          java.util.ArrayList<Residue>
              meshi.molecularElements.ResidueList
                  HomologyModeling.Loop

All Implemented Interfaces:

java.io.Serializable, java.lang.Cloneable, java.lang.Iterable<Residue>, java.util.Collection<Residue>, java.util.List<Residue>, java.util.RandomAccess

Enclosing class:

HomologyModeling

private static class HomologyModeling.Loop
extends ResidueList

Nested Class Summary

Nested classes/interfaces inherited from class meshi.molecularElements.ResidueList

ResidueList.NonDummyFilter

Field Summary

private int

rank

Fields inherited from class java.util.AbstractList

modCount

Constructor Summary

private

HomologyModeling.Loop()

Method Summary

int

rank()

Methods inherited from class meshi.molecularElements.ResidueList

atoms, filter, print, residue, sort, toString

Methods inherited from class java.util.ArrayList

add, add, addAll, addAll, clear, clone, contains, ensureCapacity, get, indexOf, isEmpty, lastIndexOf, remove, remove, removeRange, set, size, toArray, toArray, trimToSize

Methods inherited from class java.util.AbstractList

equals, hashCode, iterator, listIterator, listIterator, subList

Methods inherited from class java.util.AbstractCollection

containsAll, removeAll, retainAll

Methods inherited from class java.lang.Object

finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface java.util.List

containsAll, equals, hashCode, iterator, listIterator, listIterator, removeAll, retainAll, subList

Field Detail

rank

private int rank

Constructor Detail

HomologyModeling.Loop

private HomologyModeling.Loop()

Method Detail

rank

public int rank()