Avraham Melkman             
my mugshot 

and some of 
my family

• Research Interests
• Recent Publications
• Address

Current research interest

Boolean networks. Clustering algorithms for gene expression data. Functional prediction.

Recent Publications

• Tatsuya Akutsu, Sven Kosub, Avraham A. Melkman, and Takeyuki Tamura,
  Finding a Periodic Attractor of a Boolean Network, IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB), 9 , 1410-1421, 2012.
• Dikla Dotan-Cohen, Dana Moonshine, Moshe Natan, Yonat Shemer-Avni and Avraham A. Melkman,
  GO for Integration of Expression Data, In Silico Biology, 11, 11-17, 2012.
• Tatsuya Akutsu, Avraham A. Melkman, and Takeyuki Tamura,
  Singleton and 2-periodic attractors of sign-definite Boolean networks, Information Processing Letters, 112, 35-38, 2012.
• Tatsuya Akutsu, Avraham A. Melkman, Takeyuki Tamura, and Masaki Yamamoto,
  Determining a Singleton Attractor of a Boolean Network with Nested Canalyzing Functions , Journal of Computational Biology, 18, 1275-1290, 2011.
• Avraham A. Melkman, Takeyuki Tamura, and Tatsuya Akutsu,
  Determining a singleton attractor of an AND/OR Boolean network in O(1.587^n) time, Information Processing Letters, 110(14-15), 565-569, 2010.
• Dikla Dotan Cohen, Simon Kasif and Avraham A. Melkman,
  Seeing the forest for the trees: using the Gene Ontology to restructure hierarchical clustering, Bioinformatics 25(14), 1789-1795, 2009.
• Dikla Dotan-Cohen, Stan Letovsky, Avraham A. Melkman, and Simon Kasif,
  Biological Process Linkage Networks. PLoS ONE 4(4): e5313. doi:10.1371, April 2009.
• Dikla Dotan Cohen, Avraham A. Melkman and Simon Kasif,
  Hierarchical tree snipping: clustering guided by prior knowledge, Bioinformatics 23, 3335 - 3342, 2007.
• Qiaofeng Yang, Stefano Lonardi and Avraham Melkman,
  A compression-boosting transform for two-dimensional data, In Lecture Notes in Computer Science, Siu-Wing Cheng and Chung Keung Poon editor, vol. 4041 of Information Systems and Applications, 126-137, Springer-Verlag, 2006.
• Avraham A. Melkman and Eran Shaham,
  Sleeved coClustering Proc. KDD'04 , 635-640 ( manuscript.pdf)

Address

    
    
	melkman@spam [my feeble attempt to hide cs.bgu.ac.il]
    Department of Computer Science
    Ben-Gurion University of the Negev
    Beer-Sheva, Israel 84105

    Tel: (972-8) 6461-625
    FAX: (972-8) 6472-909

Last modified December 31, 2011