These summaries were manually compiled by Amir Mishalia mishalia@cs.bgu.ac.il and Nir Esterman esterman@cs.bgu.ac.il . The scores, pdb names and the SCOP codes listed may contain errors. Despite efforts to obtain the most accurate information in these summaries, errors may appear and we assume no responsibility regarding the contents listed. However, if you find errors or typos in the below information, please e-mail Nir, Amir and/or Dani Fischer dfischer@cs.bgu.ac.il and we would be more than happy to correct them.
| Fold | Number of servers in which fold was found | Number of times fold was found | Number of times fold found at rank 1 | Number of times fold scored within 10% of threshold | selected server/pdb | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
3.31
| 16
| 58
| 13
| 11
| Any/1a5t or 1do0
| 1.113
| 12
| 15
| 4
| 3
| 3.1
| 4
| 4
| 0
| |
| SERVER NAME | HIT1 | S1 | HIT2 | S2 | HIT3 | S3 | HIT4 | S4 | HIT5 | S5 | List of top 5 pdb codes | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| PDB-BLAST <0.1 | 3.31.1
| 4e-11
|
3.31.1
| 4e-11
|
1c4oA
| 0.004
|
1d2m
| 0.004
| 3.31.1
| 0.011
| 1do2B | 1do0A 1c4oA 1d2mA 2shkB FFAS | >8.0
1.113.1 | 3.31.1 19.58
|
3.31.1
| 14.47
|
3.31.1
| 10.37
|
1.49.1 | 2.2.5 4.77.1 5.15
|
1.105.1
| 4.83
| 1a5t | 1do0A 1nsf 1bf5A 1sig 3D-PSSM | <0.37
3.31.1
| 2.41e-02
|
1.113.1 | 3.31.1 2.49e-02
|
1.37.1 | 3.16.2 7.34e-01
|
3.31.1 | 1.113.1 2.15
|
3.31.1
| 2.79
| 1dooE | 1a5t 1a04A 1a5t2 1d2nA GENTHREADER | >0.7
1.113.1 | 3.31.1 1.000
|
3.31.1 | 1.113.1 1.000
|
3.31.1
| 0.999
|
3.31.1
| 0.998
|
1.30.1 | 3.31.1 0.968
| 1a5t | 1a5t2 1d2nA 1dooE 1fts m-GENTHREADER | >0.7
1.113.1 | 3.31.1 1.000
|
3.31.1
| 1.000
|
3.31.1 | 1.113.1 1.000
|
3.31.1
| 0.999
|
1.30.1 | 3.31.1 0.968
| 1a5t | 1dooE 1a5t2 1d2nA 1fts BIOINBGU(gonp) | >6.0
4.55.2
| 4.3
|
3.31.1
| 4.2
|
1.113.1 | 3.31.1 4.1
|
3.31.1
| 3.5
|
4.55.2
| 3.3
| 1eps | 1do0A 1a5t 1nipB 1eps_100-427 BIOINBGU(gonpm) | >6.0
1yrg
| 4.8
|
3.31.1
| 4.7
|
3.31.1
| 4.6
|
1.113.1 | 3.31.1 3.9
|
3.1.9
| 3.8
| 1yrgA | 1do0A 1nipB 1a5t 1ald BIOINBGU(seqpprf) | >7.0
1.113.1 | 3.31.1 5.8
|
3.31.1
| 4.6
|
3.31.1
| 3.6
|
3.16.2 | 3.34.1 3.4
|
3.62.1
| 3.4
| 1a5t | 1do0A 1nipB 1a2oA 3tatA BIOINBGU(seqpmprf) | >7.0
3.31.1
| 7.2
|
1.113.1 | 3.31.1 6.3
|
3.31.1
| 5.5
|
1nbd
| 4.7
|
3.31.1
| 4.1
| 1do0A | 1a5t 1d2n 1nbd 3adk BIOINBGU(prfseq) | >6.0
3.31.1
| 14.1
|
1.113.1 | 3.31.1 6.9
|
3.31.1
| 6.2
|
1yrg
| 5.9
|
1.30.1 | 1.38.1 3.31.1 4.6
| 1do0A | 1a5t 1d2n 1yrgA 2ffhA BIOINBGU(consensus) | >12.0
3.31.1
| 28.1
|
1.113.1 | 3.31.1 14.7
|
1yrg
| 6.7
|
3.31.1
| 4.6
|
4.55.2
| 4.5
| 1do0A | 1a5t 1yrgA 1d2n 1eps SAM-T99 | <0.01
3.31.1
| 5.50e-28
|
3.31.1
| 3.30e-16
|
3.31.1
| 1.50e-06
|
3.31.1
| 5.74e-06
|
3.31.1
| 8.06e-06
| 1do2A | 1do0A 1d2nA 2shkA 1gky FUGUE | >6
3.31.1
| 7.52
|
1qhx
| 7.13
|
3.31.1
| 6.67
|
5.11.1
| 4.25
|
1.113.1 | 3.31.1 4.06
| 1dooE | 1qhxA 1d2nA 1ab4 1a5t P-MAP | <0.05
3.31.1
| 9.77e-08
|
3.31.1
| 2.15e-03
|
1.113.1 | 3.31.1 7.86e-02
|
3.31.1
| 9.61e-02
|
1d9x
| 1.07e-01
| 1dooE | 1shkA 1a5t 1ckeA 1d9xA SAUSSAGE | n.a
1.110.1
| 2.98
|
1.110.1
| 2.68
|
4.124.1 | 4.125.1 2.5
|
9.8.1
| 2.4
|
3.51.4 | 4.48.3 2.3
| 3bct | 1bk5A 2mbr 3ldh 1aye ssPsi | n.a. 3.81.1
| 1070
| 3.62.1
| 1040
| 3.62.1
| 1040
| 3.9.1
| 1040
| 3.16.5 | 3.1.18 1030
| 1mioB | 1dgd 2gsaA 1dfjI 2reqB1 RPFOLD | n.a. 2.75.1
| 72.87
| 5.3.1
| 72.76
| 2.9.1
| 72.66
| 3.71.1
| 72.61
| 3.71.1
| 72.60
| 2pec | 3pte 1sva1 1walA 1idm LOOPP | n.a. 3.82.1
| 5.0
| 2.1.1
| 4.6
| 3.31.1 | 4.40.1 4.4
| 3.1.10 | 4.45.1 4.3
| 5.1.1
| 4.2
| 2bgu | 1igyB 2reb 1bkhA 7apiA THREADWITHSEQ | n.a. 3.88.1
| 1.43
| 3.64.1
| 1.32
| 3.56.1
| 1.17
| 3.88.1
| 1.08
| 3.1.2
| 0.62
| 2dri | 1din 1opr 1gca 2tysA 123D+ | n.a. 3.31.1
| 7.41
| 3.31.1
| 6.65
| 3.31.1
| 6.06
| 3.31.1
| 5.29
| 3.31.1
| 4.90
| 1d2nA | 1a5t2 1dooE 1dar2 1ckeA |