WARNING

These summaries were manually compiled by Amir Mishalia mishalia@cs.bgu.ac.il and Nir Esterman esterman@cs.bgu.ac.il . The scores, pdb names and the SCOP codes listed may contain errors. Despite efforts to obtain the most accurate information in these summaries, errors may appear and we assume no responsibility regarding the contents listed. However, if you find errors or typos in the below information, please e-mail Nir, Amir and/or Dani Fischer dfischer@cs.bgu.ac.il and we would be more than happy to correct them.

T0114

Fold Number of servers in which fold was found Number of times fold was found Number of times fold found at rank 1 Number of times fold scored within 10% of threshold selected server/pdb
2.1 10 28 7 0
2.28 3 8 1 0
7.3 6 9 2 0
7.39 3 3 2 0
1.26 3 3 2 0
2.38 4 4 0 0
2.77 2 4 0 0
9.1 2 2 0 0
3.42 2 2 0 0
2.6 2 2 0 0
4.27 1 2 1 0
2.49 1 2 1 0
2.22 1 3 0 0



T0114

SERVER NAME HIT1 S1 HIT2 S2 HIT3 S3 HIT4 S4 HIT5 S5 List of top 5 pdb codes
PDB-BLAST
<0.1




FFAS
>8.0
7.3.7 5.59 7.3.7 4.92 7.3.7 4.54 2.38.2 4.49 1.60.1 4.32 1myn
2sn3
2b3cA
1ptoL
1b0xA
3D-PSSM
<0.37
1.97.1 2.1.1 1.38e+01 2.1.1 6.9.1 1.64e+01 2.1.2 2.08e+01 2.41.3 2.42.1 3.31.1 2.11e+01 2.1.1 2.3.1 2.66.1 3.1.7 2.22e+01 1clc2
1svb1
2fnbA
1d2eA1
1cyg1
GENTHREADER
>0.7
1.26.1 7.39.4 0.155 2.77.1 0.107 2.77.1 0.107 9.1.1 0.103 7.35.1 7.42.1 0.062 1ryt2
1dgwX1
1dgwX
1dv4A3
1rmd1
m-GENTHREADER
>0.7
1.26.1 7.39.4 0.144 2.77.1 0.107 2.77.1 0.107 9.1.1 0.95 2.38.2 0.49 1ryt2
1dgwX1
1dgwX
1dv4A3
3chbD
BIOINBGU(gonp)
>6.0
2.1.1 4.1 2.1.1 3.3 2.1.2 3.2 2.1.2 3.2 2.40.1 3.0 1ksr
1dlhA_82-182
1ten
2fnb
4fgf
BIOINBGU(gonpm)
>6.0
2.1.1 3.8 2.1.2 3.2 2.1.1 3.2 2.1.2 3.2 2.1.1 2.8 1ksr
1ten
1dlhA_82-182
2fnb
1tnm
BIOINBGU(seqpprf)
>7.0
2.1.2 3.5 7.3.15 3.4 2.2.2 3.2 2.1.6 3.2 2.6.3 3.1 2fnb
4htcI
1xbd
1ncg
1who
BIOINBGU(seqpmprf)
>7.0




BIOINBGU(prfseq)
>6.0
2.1.1 4.1 2.1.1 3.6 7.3.15 3.4 2.1.1 3.4 2.1.2 3.0 1dlh_82-182
1ksr
4htcI
1clc_35-134
1ten
BIOINBGU(consensus)
>12.0
2.1.1 9.7 2.1.2 7.0 2.1.1 6.9 7.3.15 4.3 2.1.2 3.3 1ksr
2fnb
1dlh_82-182
4htcI
1ten
SAM-T99
<0.01
2.28.1 5.451 2.28.1 5.451 2.28.1 5.451 2.28.1 5.451 2.1.9 4.88.1 9.93 1qh6A
1qh6B
1qh7A
1qh7B
1qtsA
FUGUE
>6
7.3.15 4.24 1ddd6 3.30 2arnA 3.19 1be3I 2.96 4.95.1 4.138.1 2.90 4htcI
1ddd6
2arnA
1be3I
1ush1
P-MAP
<0.05
2.28.1 2.57 2.28.1 2.57 2.38.2 7.66 5.17.1 2.58e+01 2.28.1 2.90e+01 1xnd
1xypB
1chqD
7hscA
1bcx
SAUSSAGE
n.a
4.77.1 2.36 1.77.1 2.06 7.3.11 1.99 7.3.10 1.96 1.87.1 1.85 1qadA
1b79A
1emn
1imt
1agrE
ssPsi
n.a.
2.57.1 0.32e+03 2.22.1 0.318e+03 2.22.1 0.284e+03 2.1.1 0.282e+03 2.22.1 0.282e+03 1avdA
1sfp
1sppA
1kb5B
1sppB
RPFOLD
n.a.
1.126.4 73.35 4.78.1 72.79 1jelP 72.75 4.78.1 72.71 3.42.1 72.54 2prgC
1poh
1jelP
1opd
1aba
LOOPP
n.a.
3.70.1 3.2 1.26.1 7.39.4 3.1 2.28.1 2.9 4.5.1 2.9 3.42.1 2.9 1alkA
1ryt
1enxA
1onc
1jhb
THREADWITHSEQ
n.a.
2.1.6 0.708 2.44.1 0.664 2.1.1 0.428 2.38.2 4.147.1 0.4 2.10.1 0.386 1edhA
1jxpA
2ncm
1bcpB
1ag4
123D+
n.a.
2.49.2 4.27.1 4.81 2.1.1 4.39 2.49.2 4.27.1 3.94 2.6.3 3.79 7.18.1 3.5 1cr5A1
1vcaA2
1qcsA1
1who
1qubA4