WARNING

These summaries were manually compiled by Amir Mishalia mishalia@cs.bgu.ac.il and Nir Esterman esterman@cs.bgu.ac.il . The scores, pdb names and the SCOP codes listed may contain errors. Despite efforts to obtain the most accurate information in these summaries, errors may appear and we assume no responsibility regarding the contents listed. However, if you find errors or typos in the below information, please e-mail Nir, Amir and/or Dani Fischer dfischer@cs.bgu.ac.il and we would be more than happy to correct them.

T0110

Fold Number of servers in which fold was found Number of times fold was found Number of times fold found at rank 1 Number of times fold scored within 10% of threshold selected server/pdb
4.47 4 4 3 1
5.5 4 6 2 1
2.43 5 5 1 0
1.4 5 5 0 0
4.109 4 4 1 0
3.16 4 4 0 0
4.48 2 2 2 0
4.44 3 3 1 0
4.59 3 3 0 0
1.65 3 3 0 0
2.80 2 3 1 0
4.54 2 2 1 0
4.145 2 2 1 0
The consensus prediction is given by the most frequent fold appearing within the top 5 hits of all servers. The consensus prediction is selected from one of the servers that scored the fold the strongest.

T0110

SERVER NAME HIT1 S1 HIT2 S2 HIT3 S3 HIT4 S4 HIT5 S5 List of top 5 pdb codes
PDB-BLAST
<0.1
5.5.1 0.033 5.5.1 0.033 2.28.1
2.40.4
4.76.1
8.3.2
3.2 4.119.1 4.2 4.119.1 4.2 1qqwC
1qqwA
3btaA
1seiB
1seiA
FFAS
>8.0
3its 4.98 5.5.1 4.59 2c17 4.37 3.1.11 4.15 10.40.1 4.04 3its
8catB
2c17A
1fiy
1tvt
3D-PSSM
<0.37
3.31.1
4.44.3
1.42 1.120.1
3.7.5
4.47.1
2.24 4.90.1 2.44 4.54.3 2.99 2.36.1 3.86 1egaA2
1oelA3
1d0nA6
1dd5A
1b34A
GENTHREADER
>0.7
4.48.15 0.353 3.46.1
4.87.1
0.127 1.4.6 0.114 1.65.1 0.111 1.9.1 0.103 1bxyA
1adjA1
1wjaA
1bo9A
1bbl
m-GENTHREADER
>0.7
4.48.15 0.353 3.46.1
4.87.1
0.127 1.4.6 0.114 1.65.1 0.111 4.59.2 0.110 1bxyA
1adjA1
1wjaA
1bo9A
1xxaA
BIOINBGU(gonp)
>6.0
4.145.1 4.0 3.47.1 3.8 3.2.1 3.8 4.59.1 3.6 1.73.1 3.5 1def
1cw0A
1lldA_7-149
1dchA
1hus
BIOINBGU(gonpm)
>6.0
4.47.1 4.8 2.43.1 4.6 3.25.1 4.5 4.109.1 3.9 4.12.1 3.5 1grl_137-409
1bnkA
2dln_1-96
1xra_1-101
1a6f
BIOINBGU(seqpprf)
>7.0
2.43.1 3.6 1.65.1 3.4 1e2c 3.2 1.4.4 3.2 1.48.1
3.16.5
3.1 1bnkA
1bo9
1e2cA
1lea
1bmt
BIOINBGU(seqpmprf)
>7.0
4.109.1 3.5 2.43.1 3.3 7.8.1 3.2 1.4.4
4.59.2
3.2 4.41.1 3.1 1xra
1bnkA
1tocR
1b4aA
1914
BIOINBGU(prfseq)
>6.0
4.47.1 6.2 4.109.1 5.6 2.36.1 4.6 4.65.1 3.6 2.43.1 3.1 1grl_137-409
1xra_1-101
1b34A
1otgA
1bnkA
BIOINBGU(consensus)
>12.0
4.47.1 11.1 2.43.1 8.6 4.109.1 7.6 4.145.1 4.4 3.47.1 1.9 1grl_137-409
1bnkA
1xra_1-101
1def
1cw0A
SAM-T99
<0.01
7.37.1 20.19 NO SECOND RESULT NO THIRD RESULT NO FOURTH RESULT NO FIFTH RESULT 1hra



FUGUE
>6
1.28.1 3.19.1 4.54.2 3.28 2.80.3 3.04 4.155.1 2.98 1.27.2 2.97 3.88.1 2.87 1bs2A
1dun
1toh
1rcb
1pea
P-MAP
<0.05
5.5.1 3.16 5.5.1 3.45 8.1.3 9.66 8.1.3 9.66 8.1.3 15.03 1qqwA
8catA
1ysaC
1ysaD
1dgcA
SAUSSAGE
n.a
1.27.1 2.17 3.16.4 2.04 4.80.1 1.93 1.87.1 1.86 1.4.1 1.86 1rcb
3fx2
1b66A
1agrE
6paxA
ssPsi
n.a.
4.101.1 422 3.50.1 408 4.37.1 391 3.16.1
5.5.1
388 4.80.1 382 1ah6
1hkbA
1aipC
1iphA1
1gtpA
RPFOLD
n.a.
2.80.2 73.53 7.17.1 72.93 2.34.1 72.76 2.80.2 72.66 2.5.1 72.59 3ubpB
1wwwV
1i16
1ubpB
1adwA
LOOPP
n.a.
1.19.1 5.3 4.11.1 4.6 1.53.1 4.1 2.44.1 4.1 3.5.1 3.7 1lis
4rhn
1hssA
1bbrH
1cb2A
THREADWITHSEQ
n.a.
5.20.1 0.799 3.89.1
4.42.2
0.777 3.16.2 0.570 1.26.1 0.502 3.63.1
3.19.2
4.44.2
0.500 1lci
1pda
1srrA
1bcfA
1gpmA
123D+
n.a.
4.64.2
3.27.1
3.7 3.53.1
3.2.1
3.42 4.44.3
3.31.1
3.28 3.42.1 3.25 1.1.1 3.02 1fsz
1b0aA2
1egaA2
1kte
1cqxA1