These summaries were manually compiled by Amir Mishalia mishalia@cs.bgu.ac.il and Nir Esterman esterman@cs.bgu.ac.il . The scores, pdb names and the SCOP codes listed may contain errors. Despite efforts to obtain the most accurate information in these summaries, errors may appear and we assume no responsibility regarding the contents listed. However, if you find errors or typos in the below information, please e-mail Nir, Amir and/or Dani Fischer dfischer@cs.bgu.ac.il and we would be more than happy to correct them.
| Fold | Number of servers in which fold was found | Number of times fold was found | Number of times fold found at rank 1 | Number of times fold scored within ~10% of threshold | selected server/pdb |
|---|---|---|---|---|---|
| 3.50 | 12 | 19 | 8 | 6 | FFAS/1d9fA |
| 5.8 | 6 | 9 | 5 | 3 | |
| 3.42 | 5 | 8 | 1 | 0 | |
| 1.47 | 4 | 6 | 0 | 0 |
| SERVER NAME | HIT1 | S1 | HIT2 | S2 | HIT3 | S3 | HIT4 | S4 | HIT5 | S5 | List of top 5 pdb codes | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| PDB-BLAST <0.1 | 3.50.3 5.8.1 0.009
|
3.50.3
| 0.045
|
3.50.3
| 0.13
|
9.7.1
| 1.5
| 9.7.1
| 1.5
| 1qqcA | 1d5aA 1qhtA 1deqO 1deqB FFAS | >8.0
5.8.1 | 3.50.3 9.84
|
3.50.3 | 5.8.1 7.81
|
3.50.3
| 5.52
|
1ewa
| 5.44
|
1.1.1
| 5.13
| 1d9fA | 4bdpA 1d5aA 1ewaB 1ebt 3D-PSSM | <0.37
3.42.1
| 1.29
|
1.27.1
| 1.51
|
1.1.1
| 2.35
|
1.47.1 | 3.42.1 2.48
|
1.47.1 | 3.42.1 2.93
| 1a8l1 | 1rcb 1ash 1pd21 1gseA1 GENTHREADER | >0.7
3.50.3 | 5.8.1 0.604
|
3.50.3 | 5.8.1 0.369
|
3.16.2
| 0.179
|
1.117.1
| 0.162
|
3.16.2
| 0.154
| 1kfsA1 | 1xwl1 1dcfA 1bm0A2 1b00A m-GENTHREADER | >0.7
3.50.3 | 5.8.1 0.604
|
3.50.3 | 5.8.1 0.369
|
3.16.2
| 0.179
|
1.117.1
| 0.162
|
3.16.2
| 0.154
| 1kfsA1 | 1xwl1 1dcfA 1bm0A2 1b00A BIOINBGU(gonp) | >6.0
3.50.3
| 3.8
|
1.47.1 | 3.42.1 3.3
|
3.50.1
| 3.2
|
1.27.1
| 2.9
|
1.26.1
| 2.9
| 1kfd_324-518 | 1gsq 1glaG 1au1A 1dpsA BIOINBGU(gonpm) | >6.0
1.1.1
| 3.9
|
3.50.3
| 3.5
|
1.42.1
| 3.2
|
3.31.1
| 3.0
|
1.27.1
| 2.9
| 1mbc | 1kfd_324-518 1bhdA 1qhgA 1ilk BIOINBGU(seqpprf) | >7.0
1.4.4 | 1.74.1 3.3
|
1.47.1 | 3.42.1 3.1
|
1.47.1 | 3.42.1 3.0
|
1.75.1
| 3.0
|
1.26.1
| 2.9
| 1dprA | 1pd21 1guhA 1d2zA 1dpsA BIOINBGU(seqpmprf) | >7.0
1.25.8
| 4.1
|
3.31.3
| 3.4
|
1.4.1
| 3.3
|
1.3.1
| 2.9
|
1.42.1
| 2.8
| 1a0b | 4tmk 1mseC 1fcdC 1aa2 BIOINBGU(prfseq) | >6.0
3.50.3
| 6.4
|
4.136.1
| 4.3
|
1.77.1
| 4.1
|
1.4.1
| 3.9
|
1.75.1
| 3.8
| 1kfd | 1qh3A 1jwe 1mseC 1fad BIOINBGU(consensus) | >12.0
3.50.3
| 11.9
|
1.25.8
| 4.1
|
1.1.1
| 3.9
|
1.74.1 | 1.4.4 3.3
|
4.136.1
| 2.1
| 1kfd_324-518 | 1a0b 1mbc 1dprA 1qh3A SAM-T99 | <0.01
3.1.23
| -8.51
|
1.28.1 | 3.19.1 7.39.1 -7.83
|
3.50.1
| -7.61
|
1dgkN
| -7.42
|
1qfxA
| 7.25
| 1pymA | 1qqtA 1qhaA 1dgkN 1qfxA FUGUE | >6
1.75.1
| 2.74
|
3.55.1
| 2.55
|
3.50.3 | 5.8.1 2.51
|
2.32.2
| 2.48
|
4.2.1
| 2.46
| 1ddf | 1ihp 1clqA 1qwfB 1chkA P-MAP | <0.05
3.50.3 | 5.8.1 5.12
|
3.64.1
| 7.15
|
4.54.3
| 7.21
|
3.2.1
| 10.03
|
3.63.1
| 10.68
| 1qqcA | 1yasA 1dd5A 1bxkA 1qdlB SAUSSAGE | n.a
4.93.1
| 2.65
|
1.47.1 | 3.42.1 2.45
|
1.63.1
| 2.44
|
1.72.1
| 2.4
|
2.38.5
| 2.39
| 1a6jA | 1a0fA 1aep 1bu2A 2prd ssPsi | n.a. 3.1.7
| 565
| 3.1.7
| 552
| 3.2.1
| 546
| 3.51.4
| 534
| 3.1.15
| 530
| 2ebn | 1edt 1hdcA 1amp 1nfp RPFOLD | n.a. 4.17.1
| 72.72
| 4.2.1
| 72.53
| 4.2.1
| 72.40
| 2.9.1
| 72.02
| 4.141.1
| 71.89
| 1tmcA | 153l 1gbs 1qjzA 1ae9A LOOPP | n.a. 1.26.1 | 7.39.4 4.4
| 4.15.3
| 3.7
| 3.42.1
| 3.5
| 2.9.1
| 3.4
| 1.2.4 | 4.87.1 3.2
| 1ryt | 1ndoB 1mek 2bpa2 1sryA THREADWITHSEQ | n.a. 3.16.2
| 1.52
| 3.31.1
| 1.10
| 3.49.1
| 1.01
| 3.2.1 | 4.140.1 0.94
| 2.33.1 | 3.2.1 0.90
| 3chy | 1dad 1pdo 1ldg 1qorA 123D+ | n.a. 3.17.1
| 4.04
| 1.1.1
| 3.84
| 3.50.3
| 3.60
| 1.78.1
| 3.31
| 1.1.1
| 3.25
| 1a9xA2 | 1mba 1b9dA 1qc7A 1b0b |