These summaries were manually compiled by Amir Mishalia mishalia@cs.bgu.ac.il and Nir Esterman esterman@cs.bgu.ac.il . The scores, pdb names and the SCOP codes listed may contain errors. Despite efforts to obtain the most accurate information in these summaries, errors may appear and we assume no responsibility regarding the contents listed. However, if you find errors or typos in the below information, please e-mail Nir, Amir and/or Dani Fischer dfischer@cs.bgu.ac.il and we would be more than happy to correct them.
| Fold | Number of servers in which fold was found | Number of times fold was found | Number of times fold found at rank 1 | Number of times fold scored within ~10% of threshold | selected server/pdb | |||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NONE
|
|
|
|
| See note below
| 1.4
| 8
| 8
| 2
| 0
| 4.40
| 5
| 5
| 0
| 0
| 3.31
| 5
| 5
| 0
| 0
| 2.38
| 3
| 3
| 2
| 0
| 10.58
| 3
| 3
| 2
| 0
| 4.79
| 4
| 4
| 0
| 0
| 4.13
| 3
| 3
| 1
| 0
| 2.77
| 2
| 2
| 2
| 0
| 4.48
| 3
| 3
| 0
| 0
| |
| SERVER NAME | HIT1 | S1 | HIT2 | S2 | HIT3 | S3 | HIT4 | S4 | HIT5 | S5 | List of top 5 pdb codes | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB-BLAST <0.1 | 3.3.1 4.72.1 2.9
|
3.3.1 | 4.72.1 2.9
|
3.35.1
| 4.9
|
3.35.1
| 4.9
| 1.127.1
| 6.5
| 1ebdB | 1ebdA 2pkc 2prk 1bvb FFAS | >8.0
4.13.8
| 6.33
|
1.4.3
| 4.65
|
10.40.1
| 4.48
|
1.2.3
| 4.37
|
4.48.10
| 4.00
| 1tif | 1c20A 1tvs 1cxzB 1aps 3D-PSSM | <0.37
1.60.4
| 5.5
|
1.23.1
| 6.46
|
1.37.1 | 1.114.1 7.65
|
4.39.1
| 9.57
|
1.4.4
| 9.61
| 1doqA | 1b67A 2tct1 1ctf 1lea GENTHREADER | >0.7
1.4.4 | 2.77.4 0.402
|
1.59.1 | 3.61.1 1.286
|
3.31.1 | 4.40.1 0.266
|
4.48.16
| 0.185
|
1.65.1
| 0.147
| 2cgpC1 | 1af71 2reb2 1cpzA 1bo9A m-GENTHREADER | >0.7
1.4.4 | 2.77.4 0.320
|
1.59.1 | 3.61.1 0.286
|
3.31.1 | 4.40.1 0.266
|
4.48.16
| 0.185
|
1.65.1
| 0.147
| 2cgpC1 | 1af71 2reb2 1cpzA 1bo9A BIOINBGU(gonp) | >6.0
2.38.4
| 3.8
|
3.89.1 | 4.42.2 3.6
|
4.39.1
| 3.6
|
4.13.8
| 3.5
|
4.79.1
| 3.3
| 1sro | 1pda 1ctf 1tif 1iba BIOINBGU(gonpm) | >6.0
2.38.4
| 3.4
|
10.58.1
| 3.2
|
3.31.1 | 4.40.1 3.1
|
4.79.1
| 3.1
|
4.13.8
| 3.1
| 1sro | 1gp8 2reb 1iba 1tif BIOINBGU(seqpprf) | >7.0
10.58.1
| 4.6
|
4.78.1
| 3.4
|
3.31.1 | 4.40.1 3.3
|
4.78.1
| 3.2
|
2.79.1
| 3.2
| 1gp8 | 1ptf 2reb 1pch 1lab BIOINBGU(seqmprf) | >7.0
NO
| RESULTS
|
RECEIVED
|
|
|
|
|
|
|
| | BIOINBGU(prfseq) | >6.0
2.43.1
| 3.5
|
1.4.4
| 3.3
|
3.3.1 | 4.14.1 3.0
|
4.79.1
| 3.0
|
10.4.1
| 2.8
| 1bnk | 1qpm 1gal 1iba 1cw5 BIOINBGU(consensus) | >12.0
10.58.1
| 9.3
|
2.38.4
| 7.8
|
3.31.1 | 4.40.1 3.5
|
2.43.1
| 3.5
|
1.4.4
| 2.7
| 1gp8 | 1sro 2reb 1bnkC 1qpm SAM-T99 | <0.01
3.82.1
| 49
|
NO SECOND | RESULT
|
NO THIRD | RESULT
|
NO FOURTH | RESULT
|
NO FIFTH | RESULT
| 1gpb | FUGUE | >6
3.67.1
| 4.15
|
2.83.1
| 3.19
|
7.35.1
| 3.18
|
1eo0
| 2.97
|
4.79.1
| 2.90
| 1rkd | 3ezmA 1tf3 1eo0A 1iba P-MAP | <0.05
2.1.1 | 4.17.1 88.5
|
1dd2A
| 102.0
|
1ee4
| 127.7
|
10.35.1
| 133.9
|
1.4.6
| 180.9
| 1ldpP | 1dd2A 1ee4C 1afoB 1aub SAUSSAGE | n.a
1.61.1
| 2.17
|
7.23.1
| 2.12
|
4.7.1
| 2.06
|
1.4.4
| 1.93
|
7.1.1
| 1.90
| 1a6s | 1apj 1ubpA 1aoy 2gf1 ssPsi | n.a. 1.29.2
| 253
| 1.29.2
| 251
| 3.8.1
| 250
| 1.72.1
| 244
| 1.23.1
| 235
| 1imp | 1ayi 1a19A 1aisB2 1bfmA RPFOLD | n.a. NO
| RESULT
| RECEIVED
|
| ???????
|
|
|
|
|
| | LOOPP | n.a. 1.65.1
| 4.0
| 1aak
| 3.5
| 1.119.1
| 2.4
| 4.13.1
| 2.4
| 2.47.1
| 2.4
| 1bo9 | 1aak 1fps 2ptl 1pplE THREADWITHSEQ | n.a. 4.13.3
| 0.72
| 1.93.1 | 3.6.1 0.64
| 2.44.1 | 7.15.1 0.62
| 4.37.1
| 0.60
| 2.66.1 | 3.1.7 0.59
| 2rgf | 1rlr 1sgpE 1efuB 1vjs |