These summaries were manually compiled by Amir Mishalia mishalia@cs.bgu.ac.il and Nir Esterman esterman@cs.bgu.ac.il . The scores, pdb names and the SCOP codes listed may contain errors. Despite efforts to obtain the most accurate information in these summaries, errors may appear and we assume no responsibility regarding the contents listed. However, if you find errors or typos in the below information, please e-mail Nir, Amir and/or Dani Fischer dfischer@cs.bgu.ac.il and we would be more than happy to correct them.
| Fold | Number of servers in which fold was found | Number of times fold was found | Number of times fold found at rank 1 | Number of times fold scored within ~10% of threshold | selected server/pdb | ||||
|---|---|---|---|---|---|---|---|---|---|
| 2.75 | 11 | 30 | 9 | 8 | FFAS / 1dbgA | ||||
| 2.9 | 7 | 13 | 2 | 1 | |||||
| 2.64 | 7 | 10 | 2 | 0 | |||||
2.1
| 7
| 7
| 0
| 0
| 2.17
| 3
| 3
| 0
| 0
| |
| SERVER NAME | HIT1 | S1 | HIT2 | S2 | HIT3 | S3 | HIT4 | S4 | HIT5 | S5 | List of top 5 pdb codes | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| PDB-BLAST <0.1 | 2.28.1
2.40.4
4.76.1
8.3.2
| 2e-07
| 2.28.1
2.40.4
| 0.052
|
|
|
|
|
|
| 3btaA | 1a8d FFAS | >8.0 2.75.1
| 9.71
| 1ei3
| 5.20
| 2.28.1
2.40.4
4.76.1
8.3.2
| 4.54
| 2.1.13
4.147.1
| 4.33
| 10.35.1
| 4.18
| 1dbgA | 1ei3A 3btaA 1cwvA 1afoA 3D-PSSM | <0.37 2.75.1
| 7.43e-03
| 2.75.1
| 8.48e-02
| 2.75.1
| 3.05e-01
| 2.75.1
| 3.92e-01
| 2.75.1
| 5.40e-01
| 1dbga | 1pcl 1air 1czfa 1idk GENTHREADER | >0.7 2.75.1
| 1.0
| 2.75.1
| 1.0
| 2.75.1
| 0.955
| 2.75.1
| 0.934
| 2.1.13
4.147.1
| 0.805
| 1dbgA | 1rmg 1dabA 1qcxA 1cwvA m-GENTHREADER | >0.7 2.75.1
| 1.0
| 2.75.1
| 1.0
| 2.75.1
| 1.0
| 2.75.1
| 1.0
| 4.77.1
| 0.969
| 1czfA | 1dbgA 1rmg 1bhe 1cwe BIOINBGU(gonp) | >6.0 2.64.1
| 4.1
| 2.9.1
| 4.0
| 2.9.1
| 3.9
| 2.1.1 2.17.1 2.64.1
| 3.6
| 2.61.1
| 3.6
| 1gof | 2cas 1dnv 1gof 1ck7 BIOINBGU(gonpm) | >6.0 2.64.1
| 4.7
| 2.1.1
| 4.3
| 2.9.1
| 4.3
| 2.9.1
| 3.6
| 2.9.1
| 3.5
| 1gof | 1mco 1dnv 1tmf 2cas BIOINBGU(seqpprf) | >7.0 2.75.1
| 10.6
| 2.9.1
| 5.2
| 2.9.1
| 4.9
| 2.1.1 2.17.1 2.64.1
| 4.0
| 2.64.1
| 3.9
| 1dbg | 1dnv 2cas 1gof 1gof BIOINBGU(seqpmprf) | >7.0 2.75.1
| 10.6
| 2.9.1
| 5.6
| 2.64.1
| 4.8
| 2.1.1 2.17.1 2.64.1
| 4.3
| 2.75.1
| 4.1
| 1dbg | 1dnv 1gof 1gof 1rmg BIOINBGU(prfseq) | >6.0 2.9.1
| 6.8
| 2.9.1
| 5.3
| 3.1.7
| 4.6
| 2.64.1
| 4.3
| 2.38.5
| 4.3
| 1dnv | 2cas 1cgt 1gof 1pyp BIOINBGU(consensus) | >12.0-15.0 2.75.1
| 21.6
| 2.9.1
| 14.9
| 2.64.1
| 12.3
| 2.9.1
| 7.5
| 2.1.1
| 3.5
| 1dbg | 1dnv 1gof 2cas 1mcoh SAM-T98 | <-20 2.75.1
| -23.56
| 2.75.1
| -15.82
| 4.149.1
| -15.64
| 2.75.1
| -13.84
| 2.75.1
| -12.5
| 1rmg | 2pec 3fib 1air 1tyv SAM-T99 | <0.01
|
|
|
|
|
|
|
|
|
| FUGUE | >6 2.75.1
| 4.09
| 2.75.1
| 3.53
| 3.68.1
| 2.80
| 2.75.1
| 2.79
| 2.75.1
| 2.60
| 1dbgA | 1rmg 1b7bA 2pec 1tyu P-MAP | <0.05 2.2.3
| .018
| 2.75.1
| .205
| 2.75.1
| .206
| 1dlla
| .493
| 1dfq
| .493
| 1amx | 1bn8a 2bspa 1dlla 1dfqa SAUSAGE | n.a 4.106.1
| 3.21
| 4.13.9 4.107.1
| 3.16
| 2.31.1 4.111.1 6.2.1
| 3.05
| 3.2.1 3.53.1
| 3
| 1.3.1 2.65.2
| 2.95
| 1az9 | 2glsd 3bccb 1k89 1qksa ssPsi | n.a 2.9.1
| 1180
| 2.75.1
| 1170
| 1.126.1 2.65.1
| 1150
| 2.75.1
| 1150
| 2.64.1
| 1110
| 2cas | 1tyu 4aaha 1rmg 1gof LOOPP | n.a. 2.1.1
| 4.3
| 1.97.1
| 3.2
| 2.1.11 | 4.138.1 3.1
| 1.97.1
| 3.1
| 2.33.1 | 3.2.1 3.0
| 1cf1A | 3gly 4kbpA 1gai 1kevA |