These summaries were manually compiled by Amir Mishalia mishalia@cs.bgu.ac.il and Nir Esterman esterman@cs.bgu.ac.il . The scores, pdb names and the SCOP codes listed may contain errors. Despite efforts to obtain the most accurate information in these summaries, errors may appear and we assume no responsibility regarding the contents listed. However, if you find errors or typos in the below information, please e-mail Nir, Amir and/or Dani Fischer dfischer@cs.bgu.ac.il and we would be more than happy to correct them.
| Fold | Number of servers in which fold was found | Number of times fold was found | Number of times fold found at rank 1 | Number of times fold found within ~10% of threshold | selected server/pdb | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1.7
| 9
| 13
| 1
| 1.36
| 5
| 5
| 5
| 1.35
| 5
| 5
| 4
| 1.25
| 5
| 5
| 2
| 1.75
| 5
| 5
| 0
| 1.70
| 5
| 5
| 0
| |
| SERVER NAME | HIT1 | S1 | HIT2 | S2 | HIT3 | S3 | HIT4 | S4 | HIT5 | S5 | List of top 5 pdb codes | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| PDB-BLAST <0.1 | 1.19.1
| 2.6
| 1.19.1
| 2.6
| 4.108.1
| 7.7
| 4.108.1
| 7.7
| 1.127.1
| 7.7
| 2lynC | 1lis 1qneB 1vokA 1qdbB FFAS | >8.0 1.4.1 1.36.1
| 6.69
| 1.4.1
| 5.51
| 2.77.5
| 5.48
| 1aao
| 5.43
| 2.18.1 3.16.9 8.2.1
| 54.99
| 1au7A | 1octC 2aaca 1aao 1flcF 3D-PSSM | <0.37 1d7ma
| 6.23
| 1.7.1
| 12.6
| 1.41.1
| 13.4
| 1.7.2
| 13.6
| 1.7.1
| 13.8
| 1d7ma | 2spca 5icb 1br0a 1quua1 GENTHREADER | >0.7 1.48.2 3.20.1 4.35.3
| 0.575
| 1.7.1
| 0.276
| 1.75.1
| 0.260
| 1.13.1
| 0.219
| 1.30.1
| 0.183
| 1brwA1 | 1quuA1 1a1w 1lre 1fts01 m-GENTHREADER | >0.7 1.48.2 3.20.1 4.35.3
| 0.575
| 1.60.10 5.9.1
| 0.376
| 1.19.1
| 0.288
| 1.7.1
| 0.276
| 1.75.1
| 0.260
| 1brwA1 | 1bpyA1 2lisA0 1quuA1 1a1w BIOINBGU(gonp) | >6.0 1.25.9
| 3.0
| 1.35.1
| 3.0
| 1.75.1
| 2.7
| 3.31.1 |
2.6 |
1.7.1 |
2.6
| 1a0b | 1b0na 1fad 1qhgc 1aj3 BIOINBGU(gonpm) | >6.0 1.35.1 1.36.1
| 3.1
| 1.75.1
| 2.7
| 1.38.1
| 2.7
| 1.7.5
| 2.6
| 1.70.1
| 2.5
| 1b0na | 1a1w 1qb2a 1qsda 1abv BIOINBGU(seqpprf) | >7.0 1.35.1 1.36.1
| 3.6
| 1.70.1
| 3.3
| 1.7.2
| 3.0
| 1.25.7
| 2.8
| 1bu0d
| 2.6
| 1b0na | 1abv 1br0 1fapb 1bu0d BIOINBGU(seqpmprf) | >7.0 1.35.1 1.36.1
| 3.2
| 1.70.1
| 3.0
| 1.7.1
| 2.9
| 1.25.1
| 2.8
| 1.7.1
| 2.8
| 1b0na | 1abv 1asda 1le2 1aj3 BIOINBGU(prfseq) | >6.0 1.7.5
| 3.0
| 3.31.1
| 2.9
| 1.75.1
| 2.8
| 1.78.1
| 2.7
| 1.11.1
| 2.7
| 1qsda | 1qhgc 1fad 1qc7a 1aca BIOINBGU(consensus)
>12.0-15.0
| 1.35.1 1.36.1
| 11.4
| 1.7.5
| 5.1
| 1.70.1
| 3.9
| 1.25.9
| 3.9
| 1.7.2
| 2.3
| 1b0na | 1qsda 1abv 1a0b 1br0 SAM-T98 | <-20 4.15.3
| -8.95
| 2.41.1
| -7.82
| 8.1.3
| -7.52
| 1.98.1
| -7.44
| 1.105.1
| -6.56
| 1std | 1axj 1gcma 1aj8a 1sig SAM-T99 | <0.01 1.105.1
| 25.43
|
|
|
|
|
|
|
|
| 1sig | FUGUE | >6.0 1.63.1
| 3.59
| 1.60.9 4.141.1
| 3.02
| 4.48.28
| 2.93
| 1.110.1
| 2.54
| 1.69.1 2.46.1 3.31.1
| 2.51
| 1aep | 1a0p 1ftrA 1b3uA 1skyE P-Map | <0.05 4.54.3
| 1.78
| 11.7.1
| 2.84
| 1.3.1
| 4.92
| 8.1.5
| 7.72
| 1.3.1
| 7.72
| 1dd5A | 4hb1 1ciga 2tmaa 1ciga SAUSAGE | n.a 2.1.1
| 2.03
| 1.60.5
| 1.99
| 1.70.1
| 1.98
| 1.101.1
| 1.97
| 4.147.1
| 1.92
| 1cd8 | 1qcka 1abv 1jhga 1ixxb ssPsi | n.a 1.25.1
| 452
| 1.24.2 1.26.1
| 442
| 1.24.2 1.26.1
| 442
| 1.1.1
| 439
| 1.1.1
| 438
| 1lpe | 1mmoh 1mtyg 1hacc 1lhs rpfold | n.a
|
|
|
|
|
|
|
|
|
| | LOOPP | n.a. 1.4.4
| 4.8
| 3itr
| 4.3
| 3.13.1
| 3.4
| 1.3.1
| 3.4
| 2.41.1
| 3.3
| 2hfh | 3itr 1pauB 3c2c 1axj |