WARNING

These summaries were manually compiled by Amir Mishalia mishalia@cs.bgu.ac.il and Nir Esterman esterman@cs.bgu.ac.il . The scores, pdb names and the SCOP codes listed may contain errors. Despite efforts to obtain the most accurate information in these summaries, errors may appear and we assume no responsibility regarding the contents listed. However, if you find errors or typos in the below information, please e-mail Nir, Amir and/or Dani Fischer dfischer@cs.bgu.ac.il and we would be more than happy to correct them. T0095

T0095

Fold Number of servers in which fold was found Number of times fold was found Number of times fold found at rank 1 Number of times fold found within ~10% of threshold selected server/pdb
1.110 10 23 7 0 BIOINBGU/14psa
3.31 5 10 2 2
8.1 4 6 2 0
1.89 5 8 0 0
2.42 3 6 1
2.41 3 6 1
1.7 4 4 0
The consensus prediction is given by the most frequent fold appearing within the top 5 hits of all servers. The consensus prediction is selected from one of the servers that scored the fold the strongest

T0095

SERVER NAME HIT1 S1 HIT2 S2 HIT3 S3 HIT4 S4 HIT5 S5 List of top 5 pdb codes
PDB-BLAST
<0.1
2.41.3 2.42.1 3.31.1 0.12 2.41.3 2.42.1 3.31.1 0.12 2.41.3 2.42.1 3.31.1 4.37.1 0.45 1.60.3 3.48.1 3.0 1.60.3 3.48.1 3.0 1b23P
1eft
1aipB
1a77
1a76
FFAS
>8.0
3.31.1 21.99 3.31.1 12.79 3.31.1 5.04 1dkfA 4.42 1.60.11 3.7.1 4.78.1 4.11 1d2nA
1dooF
1shkA
1dkfA
3ezaA
3D-PSSM
<0.37
8.1.5 2.68e-01 1dn1B 1.26 1.110.7 1.36 1.7.1 1.45 1.110.8 2.47 1c1gA
1dn1B
1qjbA
1cunA
1qqeA
GENTHREADER
>0.7
1.110.2 2.32.2 0.478 1.110.1 0.361 1.110.1 0.347 1.110.1 0.344 1.110.1 0.312 1ycsB1
1qgrA
1qbkB
1bk5A
1b3uA
m-GENTHREADER
>0.7
1.110.2 2.32.2 0.478 1.110.1 0.361 1.110.1 0.347 1.110.1 0.344 1.63.1 0.341 1ycsB1
1qgrA
1qbkB
1bk5A
1aep
BIOINBGU(gonp)
>6.0
1.110.1 3.7 1.89.1 3.6 1.110.7 3.5 1.89.1 3.3 6.1.1 3.2 1lrv
1schA
14psA
1atjA
1a87
BIOINBGU(gonpm)
>6.0
1.110.1 3.7 1.89.1 3.7 1.110.1 3.4 1.7.1 3.4 1.89.1 3.2 14psA
1schA
1lrv
1cunA
1atjA
BIOINBGU(seqpprf)
>7.0
1.110.8 4.2 1.7.1 4.2 1.72.1 3.9 1.37.1 1.114.1 3.5 1.41.1 3.1 1qqe
1cunA
1volA
2tct
2scpA
BIOINBGU(seqpmprf)
>7.0
1.1.1 4.3 1.110.8 4.1 1.7.1 3.8 1.37.1 1.114.1 3.7 1.1.1 3.4 1allA
1qqe
1cunA
2tct
1cpcL
BIOINBGU(prfseq)
>6.0
1.110.7 4.3 3.31.1 3.4 1.83.1 3.4 1.89.1 3.3 1.110.8 3.3 14psA
1eft
1by1
1schA
1qqe
BIOINBGU(consensus)
>12.0-15.0
1.110.7 9.6 1.110.8 7.2 1.1.1 5.0 1.110.1 4.8 1.89.1 4.4 14psA
1qqe
1allA
1lrv
1schA
SAM-T98
<-20
1.25.9 -15.29 2.41.3 2.42.1 3.31.1 4.37.1 -12.12 2.41.3 2.42.1 3.31.1 -11.93 8.1.5 -10.01 3.50.3 -7.31 1a0b
1aipE
1eft
2tmaA
1itg
SAM-T99
<0.01
3.62.1 6.664 1.89.1 9.94 1.89.1 9.94 8.1.5 14.68 8.1.5 14.68 1bjwA
1schA
1schB
2tmaA
2tmaB
FUGUE
>6
1.25.9 4.59 1.41.1 4.34 1.97.3 3.77 1.26.1 7.39.4 3.36 1.110.5 4.2.1 2.87 2a0b
1aj4
1qazA
1ryt
1qsaA
P-MAP
<0.05
8.1.5 7.17 8.1.5 7.17 2.41.3 2.42.1 3.31.1 4.37.1 7.53 1.26.1 8.97 1.26.1 8.97 2tmaA
1c1gA
1aipA
1rci
1rcd
SAUSAGE
n.a
4.132.1 2.83 1.72.1 2.77 1.72.1 2.46 1.116.1 2.37 4.132.1 2.31 1rypF
1tfb
1bu2A
1ah7
1pmaA
ssPsi
n.a
1.119.1 0.918e+03 1.65.1 0.902e+03 1.65.1 0.899e+03 1.119.1 0.888e+03 1.108.1 0.886e+03 1fps
1ann
1aii
5eat2
1wer
RPFOLD
n.a.
4.144.1 73.71 3.2.1 72.92 3.89.1 72.80 4.20.1 72.63 2.1.1 72.57 1ptoA
2hsdA
1hslA
1ema
1tcrB
LOOPP
n.a.
3.2.1 3.8 3.38.1 3.7 3.64.1 3.4 3.58.1 3.2 3.47.1 2.9 2hsdA
1eaf
3sc2A
1poiA
1eriA