These summaries were manually compiled by Amir Mishalia
mishalia@cs.bgu.ac.il
and Nir Esterman
esterman@cs.bgu.ac.il .
The scores, pdb names and the SCOP codes listed may contain errors. Despite
efforts to obtain the most accurate information in these summaries, errors
may appear and we assume no responsibility regarding the contents
listed. However, if you find errors or typos in the below information,
please e-mail Nir, Amir and/or Dani Fischer
dfischer@cs.bgu.ac.il
and we would be more than happy to correct them.
| Fold | Number of servers in which fold was found | Number of times fold was found | Number of times fold found at rank 1 | Number of times fold scored within ~10% of threshold | selected server/pdb | ||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
4.89
| 8
| 13
| 4
| 1
| PDBBLAST/1yghA
| 1.1
| 4
| 4
| 3
| 0
| 2.51
| 6
| 6
| 1
| 0
| 4.48
| 4
| 4
| 1
| 0
| 2.1
| 3
| 5
| 1
| 0
| 1.110
| 4
| 4
| 0
| 0
| 3.56
| 3
| 3
| 1
| 0
| 3.2
| 3
| 3
| 1
| 0
| 3.31
| 2
| 5
| 0
| 0
| 3.3
| 2
| 4
| 0
| 0
| 4.75
| 2
| 2
| 1
| 0
| |
| SERVER NAME | HIT1 | S1 | HIT2 | S2 | HIT3 | S3 | HIT4 | S4 | HIT5 | S5 | List of top 5 pdb codes | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB-BLAST <0.1 | 4.89.1
| 0.16
| 4.89.1
| 0.16
| 2.9.1
| 1.4
|
|
|
|
| 1yghA | 1yghB 1fpv FFAS | >8.0 4.89.1
| 5.8
| 2.51.1
| 5.72
| 4.89.1
| 4.94
| 4.76.1
| 4.78
| 4.89.1
| 4.77
| 5gcnA | 2jhbA 1cm0A 1bm6 1yghB 3D-PSSM | <0.37 3.90.1
| 4.03
| 1.41.1
| 5.67
| 1.41.1
| 6.12
| 4.48.7
| 6.27
| 1.7.4 3.3.1 4.13.6 4.146.1 6.2.1
| 6.71
| 1bi5A2 | 1rtp1 1a4pA 1urnA 1fumA1 GENTHREADER | >0.7 2.1.1
| 0.195
| 2.1.1
| 0.137
| 1.110.6 1.97.4
| 0.09
| 7.35.1
| 0.084
| 1.12.1 | 0.073
| 1vcaA2 | 1cid2 1d8dA 2drpA1 1kdxA m-GENTHREADER | >0.7 1.110.6 1.97.4
| 0.09
| 7.35.1
| 0.084
| 2.1.1
| 0.078
| 1.12.1
| 0.073
| 1.4.4 | 1.74.1 2.32.1 0.073
| 1d8dA | 2drpA1 1cid2 1kdxA 1bi1_1 BIOINBGU(gonp) | >6.0 4.75.1
| 3.7
| 4.3.1
| 3.5
| 3.56.1
| 3.5
| 3.64.1
| 3.5
| 3.92.1
| 3.5
| 1vfrA | 1uch 1tc1A 1qge 1ctt BIOINBGU(gonpm) | >6.0 3.56.1
| 4.0
| 3.92.1
| 3.9
| 1.110.8
| 3.7
| 1.24.2
1.26.1
| 3.7
| 2.51.1
| 3.5
| 1tc1A | 1ctt 1a17 1mhy 1cl3 BIOINBGU(seqpprf) | >7.0 1.1.1
| 3.8
| 3.57.1
| 3.8
| 2.51.1
| 3.8
| 3.2.1
4.140.1
| 3.3
| 1.41.1
| 3.2
| 2lh3 | 1lfa 1cl3 1hlp 1osa BIOINBGU(seqpmprf) | >7.0 1.1.1
| 4.5
| 4.89.1
| 4.1
| 2.51.1
| 3.6
| 4.48.7
| 3.5
| 4.89.1
| 3.4
| 2lh3 | 5gcn 1cl3 1ha1 1cm0A BIOINBGU(prfseq) | >6.0 2.51.1
| 4.1
| 4.89.1
| 3.8
| 2.41.1 | 3.18.1 3.5
| 1.66.1
1.87.1
3.31.1
| 3.3
| 1.27.1
| 3.3
| 1cl3 | 1cm0A 1ndh 1agr 3ink BIOINBGU(consensus)
>12.0-15.0
| 1.1.1
| 8.3
| 2.51.1
| 7.8
| 3.56.1
| 5.4
| 4.75.1
| 3.7
| 4.89.1
| 3.0
| 2lh3 | 1cl3 1tc1A 1vfrA 1cm0A SAM-T98 | <-20 NO
| RESULT
| RECEIVED
| SAM-T99 | <0.01 4.89.1
| 5.619
| 4.89.1
| 5.619
| 3.3.1 | 4.14.1 18.83
| 3.3.1 | 4.14.1 18.83
| 3.3.1 | 4.14.1 18.83
| 1yghA | 1yghB 1b37A 1b37B 1b37C FUGUE | >6.0 3.2.1
3.16.11
| 3.96
| 1dmlB
| 3.95
| 4.74.1
| 3.75
| 3.46.1
4.87.1
| 3.32
| 4.48.6
| 3.24
| 2dldA | 1dmlB 1tbd 1kmmA 1ndlA P-Map | <0.05 4.89.1
| 1.23
| 2.1.1
| 2.06
| 1.1.1
| 9.12
| 2.1.8
| 21.4
| 11.14.1
| 38.5
| 1yghA | 1bafL 2mm1 1xsoA 1qp6B SAUSAGE | n.a 4.48.6
| 2.52
| 3.16.8
| 2.28
| 4.89.1
| 2.21
| 3.46.2
| 2.19
| 1.110.2
| 2.15
| 1npk | 1bs9 1b87A 1dioB 1bd8 ssPsi | n.a 3.88.1
| 552
| 3.2.1
| 519
| 3.88.1
| 519
| 3.64.1
| 514
| 3.61.1
| 512
| 1gca | 1dhr 1ba2A 1a8q 1vid LOOPP | n.a. 2.28.1
| 5.3
| 4.32.1
| 3.5
| 2.56.1
| 3.0
| 4.132.1
| 2.9
| 1knp
| 2.7
| 2ltnA | 1mkaA 1bbpA 1ajq 1knp RPFOLD | n.a. 4.147.1
| 73.06
| 3.31.1
| 73.01
| 3.31.1
| 72.90
| 3.31.1
| 72.88
| 3.31.1
| 72.88
| 1bnlA | 2q21 1ceeA 1am4D 1q21 |