These summaries were manually compiled by Amir Mishalia mishalia@cs.bgu.ac.il and Nir Esterman esterman@cs.bgu.ac.il . The scores, pdb names and the SCOP codes listed may contain errors. Despite efforts to obtain the most accurate information in these summaries, errors may appear and we assume no responsibility regarding the contents listed. However, if you find errors or typos in the below information, please e-mail Nir, Amir and/or Dani Fischer dfischer@cs.bgu.ac.il and we would be more than happy to correct them.
| Fold | Number of servers in which fold was found | Number of times fold was found | Number of times fold found at rank 1 | Number of times fold found within ~10% of thresholds | selected server/pdb | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
3.2
| 11
| 24
| 6
| 3
| 4.140
| 8
| 14
| 6
| 3
| 4.121
| 4
| 7
| 2
| 0
| 3.25
| 4
| 5
| 1
| 0
| |
| SERVER NAME | HIT1 | S1 | HIT2 | S2 | HIT3 | S3 | HIT4 | S4 | HIT5 | S5 | List of top 5 pdb codes | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB-BLAST <0.1 | 3.26.1 3.30.1 4
|
3.26.1 | 3.30.1 4
|
3.62.1
| 5.2
|
3.62.1
| 5.2
| NO FIFTH
| RESULT
| 1zpdF 1zpdA 1qgnH 1qgnA
| FFAS | >8.0
1ebfA
| 4.93
|
2.41.1 | 3.18.1 4.88
|
3.22.1 | 3.54.1 3.67.2 4.50
|
3.2.1 | 4.140.1 4.14
|
2.1.1
2.3.1
2.66.1
3.1.7
| 4.08
| 1ebfA 1a8p 1uag 2cmd 1cyg
| 3D-PSSM | <0.37
3.2.1 | 4.140.1 1.30
|
3.61.1
| 1.36
|
3.2.1
4.140.1
| 1.48
|
3.72.2
| 1.58
|
3.61.1
| 2.76
| 1llc 1yub 1emd 1b74A 2ercA
| GENTHREADER | >0.7
1.7.4 | 3.3.1 4.13.6 4.146.1 6.2.1 0.299
|
1.72.1
| 0.187
|
3.2.1 | 4.140.1 0.138
|
1.118.1
| 0.133
|
2.75.1
| 0.128
| 1fumA2 1aisB1 1b8pA2 1b8fA0 1dabA0
| m-GENTHREADER | >0.7 NO
| RESULT
| RECEIVED
| BIOINBGU(gonp) | >6.0
3.2.1 | 4.140.1 4.9
|
3.2.1 | 3.16.11 3.9
|
3.2.1 | 4.140.1 3.9
|
3.89.1 | 3.3
|
1.115.1
| 3.2
| 2cmd 1dxy 1lld 2thi 1prg
| BIOINBGU(gonpm) | >6.0
3.2.1 | 4.140.1 6.3
|
3.36.1
| 4.1
|
1.115.1
| 3.8
|
3.2.1 | 4.140.1 3.7
|
3.64.1 | 3.5
| 2cmd 1cev 1prg 1hyh 1ehy
| BIOINBGU(seqpprf) | >7.0
3.25.1 | 4.121.1 4.1
|
2.79.2 | 3.25.1 4.121.1 3.8
|
2.28.1 | 3.7
|
3.2.1 | 3.6
|
3.67.1 | 3.3
| 2dln 1b6r 1aj0 1bxk 1rkd
| BIOINBGU(seqmprf)
>7.0
|
3.2.1 | 4.1
|
1.41.1
| 3.5
|
3.1.20 | 3.4
|
3.64.1 | 3.3
|
3.25.1 | 4.121.1 3.3
| 1bxk 2sas 1aj0 1cqw 2dln
| BIOINBGU(prfseq) | >6.0
3.2.1 | 4.140.1 8.6
|
3.2.1 | 4.140.1 5.4
|
1.41.1
| 4.2
|
3.1.2 | 4.0
|
3.72.2
| 4.0
| 2cmd 1a5z 1jba 1ad1 1b73
| BIOINBGU(consensus) | >12.0-15.0
3.2.1 | 4.140.1 19.8
|
3.2.1
| 5.5
|
3.25.1 | 4.121.1 4.8
|
3.2.1 | 4.140.1 2.9
|
3.2.1 | 3.16.11 2.5
| 2cmd 1bxkA 2dln 1a5z 1dxy
| SAM-T98 | <-20
1bdp
| -11.06
|
4.123.1
| -7.92
|
3.22.1 | 3.54.1 3.67.2 -7.81
|
1.27.1
| -7.12
|
4.123.1
| -7.11
| 1bdp 1apmE 1uag 1hmcB 1csn
| SAM-T99 | <0.01
1.58.1 | 3.92.1 3.19.1 0.32
|
2.33.1 | 3.2.1 4.63
|
2.33.1 | 3.2.1 5.95
|
3.2.1 | 3.53.1 14.19
|
4.59.2
| 21.59
| 1gln 1agnA 2ohxA 1bw9A 1xxaA
| FUGUE | >6
1.36.1
| 6.77
|
2.77.2
| 4.51
|
3.25.1 | 2.79.2 4.121.1 3.92
|
3.64.1
| 3.69
|
3.2.1 | 4.66.1 3.58
| 1uxd 1pmi 1bncA2 1qtrA 1brmA1
| P-MAP | <0.05
1.7.1
| 0.03
|
3.2.1 | 4.140.1 0.18
|
4.140.1 | 3.2.1 0.19
|
2.38.4 | 4.121.2 0.27
|
2.38.4 | 4.121.2 0.27
| 1cunB 1bmdA 1bmdB 1ckmB 1cknB
| SAUSAGE | n.a
4.48.28
| 3.14
|
4.126.1
| 2.82
|
4.124.1
4.115.1
| 2.77
|
3.51.5 | 2.73
|
3.2.1 | 4.66.1 2.7
| 1qd1A 1qlmA 2mbr 1bouB 1drw
| ssPsi | n.a. 3.81.1
| 950
| 3.80.1
| 916
| 3.80.1
| 902
| 3.62.1
| 900
| 4.55.2
| 899
| 1miob 1qpg 1php 1vpe 1tpla
| |