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BASE_TYPES_NUM
- Variable in class contextFold.rnaFolding.
StructureRecognizerImpl
Baseline
- Class in
contextFold.models
Baseline()
- Constructor for class contextFold.models.
Baseline
BEST
- Static variable in class contextFold.rnaFolding.
Traceback
bindElementTypeToFeatureTemplate(int, Boolean, Collection<FeatureTemplate>)
- Method in class contextFold.features.
FeatureManager
bindElementTypeToFeatureTemplates(int, Collection<FeatureTemplate>...)
- Method in class contextFold.features.
FeatureManager
Feature-templates binding
bindElementTypeToFeatureTemplates(int, Boolean, Collection<FeatureTemplate>...)
- Method in class contextFold.features.
FeatureManager
bindFeatures()
- Method in class contextFold.models.
Baseline
bindFeatures()
- Method in class contextFold.models.
FeatureSetter
bindFeatures()
- Method in class contextFold.models.
StHighCoHigh
bindFeatures()
- Method in class contextFold.models.
StHighCoMed
bindFeatures()
- Method in class contextFold.models.
StMedCoHigh
bindFeatures()
- Method in class contextFold.models.
StMedCoMed
bindFeatureTemplateToElementTypes(Collection<FeatureTemplate>, int...)
- Method in class contextFold.features.
FeatureManager
bindFeatureTemplateToElementTypes(Collection<FeatureTemplate>, Boolean, int...)
- Method in class contextFold.features.
FeatureManager
bindHpTypesToTemplates(Collection<FeatureTemplate>)
- Method in class contextFold.models.
FeatureSetter
bindIlTypesToTemplates(Collection<FeatureTemplate>)
- Method in class contextFold.models.
FeatureSetter
bindTemplates(Collection<FeatureTemplate>, int...)
- Method in class contextFold.models.
FeatureSetter
bindTypeToLengthCalculator(int, ElementValueCalculator)
- Method in class contextFold.features.
LogLengthValueFeature
BinnedLengthFeatureExtractor
- Class in
contextFold.features
BinnedLengthFeatureExtractor(int, int, boolean)
- Constructor for class contextFold.features.
BinnedLengthFeatureExtractor
boolValue(String)
- Method in class contextFold.common.
CmdArgumentsHandler
byteToStr(byte[])
- Static method in class contextFold.rna.
RNA
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