Uses of Class
contextFold.features.FeatureTemplate

Packages that use FeatureTemplate
contextFold.features Contains scoring model's parameterization related functionalities. 
contextFold.models Contains a set of pre-defined (untrained) parameterizations. 
 

Uses of FeatureTemplate in contextFold.features
 

Methods in contextFold.features that return FeatureTemplate
 FeatureTemplate FeatureManager.addTemplate(java.lang.String name, FeatureExtractor featureExtractor)
           
 FeatureTemplate FeatureManager.addTemplate(java.lang.String name, ValueCalculator valueCalculator)
           
 

Methods in contextFold.features that return types with arguments of type FeatureTemplate
 java.util.Collection<FeatureTemplate> FeatureManager.addBasepairTemplates(java.lang.String namePrefix)
           
 java.util.Collection<FeatureTemplate> FeatureManager.addBaseTemplates(java.lang.String namePrefix)
           
 java.util.Collection<FeatureTemplate> FeatureManager.addTemplates(java.lang.String name, FeatureExtractor... featureExtractors)
           
 

Method parameters in contextFold.features with type arguments of type FeatureTemplate
 void FeatureManager.bindElementTypeToFeatureTemplate(int elementType, java.lang.Boolean isReversed, java.util.Collection<FeatureTemplate> templates)
           
 void FeatureManager.bindFeatureTemplateToElementTypes(java.util.Collection<FeatureTemplate> templates, java.lang.Boolean isReversed, int... elementTypes)
           
 void FeatureManager.bindFeatureTemplateToElementTypes(java.util.Collection<FeatureTemplate> templates, int... elementTypes)
           
 void FeatureManager.initWeight(java.util.Collection<FeatureTemplate> basepairTemplates, FeatureExtractor firstPosContext, FeatureExtractor secondPosContext, float initialWeight, java.lang.String... contextFeatures)
           
 

Uses of FeatureTemplate in contextFold.models
 

Methods in contextFold.models that return types with arguments of type FeatureTemplate
protected  java.util.Collection<FeatureTemplate> FeatureSetter.addTemplates(java.lang.String templatePrefix, ContextFeatureExtractor[] contexts, int... types)
           
 

Method parameters in contextFold.models with type arguments of type FeatureTemplate
protected  void FeatureSetter.bindHpTypesToTemplates(java.util.Collection<FeatureTemplate> templates)
           
protected  void FeatureSetter.bindIlTypesToTemplates(java.util.Collection<FeatureTemplate> templates)
           
protected  void FeatureSetter.bindTemplates(java.util.Collection<FeatureTemplate> templates, int... types)